Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP24386 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP24386 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CHMP24386 AC008406.3-201ENST00000620001 1374 ntBASIC20.71■□□□□ 0.91
CHMP24386 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP24386 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP24386 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP24386 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP24386 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP24386 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP24386 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP24386 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP24386 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP24386 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP24386 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP24386 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHMP24386 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP24386 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP24386 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP24386 AC005703.6-201ENST00000623265 1329 ntBASIC20.69■□□□□ 0.9
CHMP24386 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP24386 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP24386 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP24386 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP24386 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP24386 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CHMP24386 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP24386 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CHMP24386 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHMP24386 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP24386 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP24386 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP24386 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMP24386 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP24386 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP24386 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP24386 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP24386 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMP24386 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMP24386 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMP24386 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP24386 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP24386 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP24386 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP24386 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP24386 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMP24386 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP24386 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP24386 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP24386 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP24386 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP24386 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CHMP24386 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP24386 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP24386 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CHMP24386 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP24386 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.67■□□□□ 0.9
CHMP24386 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP24386 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP24386 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP24386 ECEL1P1-201ENST00000373592 1742 ntBASIC20.67■□□□□ 0.9
CHMP24386 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CHMP24386 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP24386 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP24386 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CHMP24386 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP24386 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP24386 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP24386 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP24386 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP24386 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP24386 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP24386 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP24386 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CHMP24386 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CHMP24386 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP24386 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP24386 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CHMP24386 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP24386 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP24386 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP24386 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP24386 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP24386 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
CHMP24386 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.64■□□□□ 0.9
CHMP24386 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP24386 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP24386 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP24386 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CHMP24386 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.64■□□□□ 0.89
CHMP24386 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP24386 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP24386 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP24386 AC127496.7-201ENST00000625110 1798 ntBASIC20.64■□□□□ 0.89
CHMP24386 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP24386 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP24386 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms