Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CDH3P22223 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH3P22223 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH3P22223 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDH3P22223 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH3P22223 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH3P22223 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH3P22223 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH3P22223 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CDH3P22223 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CDH3P22223 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH3P22223 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDH3P22223 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.63■■□□□ 1.05
CDH3P22223 AC006455.2-201ENST00000429931 906 ntBASIC21.63■■□□□ 1.05
CDH3P22223 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH3P22223 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH3P22223 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDH3P22223 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CDH3P22223 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CDH3P22223 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CDH3P22223 AL024507.2-201ENST00000606070 2574 ntBASIC21.63■■□□□ 1.05
CDH3P22223 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH3P22223 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH3P22223 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.63■■□□□ 1.05
CDH3P22223 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH3P22223 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH3P22223 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH3P22223 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH3P22223 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH3P22223 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDH3P22223 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH3P22223 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH3P22223 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH3P22223 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.61■■□□□ 1.05
CDH3P22223 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.61■■□□□ 1.05
CDH3P22223 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.61■■□□□ 1.05
CDH3P22223 AL138724.1-201ENST00000606771 1088 ntBASIC21.61■■□□□ 1.05
CDH3P22223 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.61■■□□□ 1.05
CDH3P22223 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
CDH3P22223 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.61■■□□□ 1.05
CDH3P22223 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.61■■□□□ 1.05
CDH3P22223 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH3P22223 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDH3P22223 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH3P22223 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH3P22223 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH3P22223 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH3P22223 EDA-201ENST00000338901 1233 ntBASIC21.6■■□□□ 1.05
CDH3P22223 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.6■■□□□ 1.05
CDH3P22223 AC142381.2-201ENST00000566120 298 ntBASIC21.6■■□□□ 1.05
CDH3P22223 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH3P22223 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH3P22223 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDH3P22223 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.6■■□□□ 1.05
CDH3P22223 ABCB10P4-201ENST00000566803 2184 ntBASIC21.6■■□□□ 1.05
CDH3P22223 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDH3P22223 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH3P22223 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CDH3P22223 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH3P22223 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CDH3P22223 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.59■■□□□ 1.05
CDH3P22223 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDH3P22223 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.59■■□□□ 1.05
CDH3P22223 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDH3P22223 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH3P22223 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH3P22223 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH3P22223 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CDH3P22223 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDH3P22223 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.58■■□□□ 1.05
CDH3P22223 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.58■■□□□ 1.05
CDH3P22223 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.58■■□□□ 1.05
CDH3P22223 MIR4767-201ENST00000582827 78 ntBASIC21.58■■□□□ 1.05
CDH3P22223 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.58■■□□□ 1.05
CDH3P22223 AC011298.3-201ENST00000615796 283 ntBASIC21.58■■□□□ 1.05
CDH3P22223 AL355001.2-201ENST00000620617 1191 ntBASIC21.58■■□□□ 1.05
CDH3P22223 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CDH3P22223 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.58■■□□□ 1.04
CDH3P22223 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
CDH3P22223 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CDH3P22223 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDH3P22223 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
CDH3P22223 pRNA.6-201ENST00000610482 90 ntBASIC21.57■■□□□ 1.04
CDH3P22223 pRNA.5-201ENST00000612139 90 ntBASIC21.57■■□□□ 1.04
CDH3P22223 pRNA.11-201ENST00000618423 90 ntBASIC21.57■■□□□ 1.04
CDH3P22223 pRNA.13-201ENST00000619112 90 ntBASIC21.57■■□□□ 1.04
CDH3P22223 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH3P22223 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH3P22223 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.57■■□□□ 1.04
CDH3P22223 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CDH3P22223 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH3P22223 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH3P22223 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.56■■□□□ 1.04
CDH3P22223 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH3P22223 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.56■■□□□ 1.04
CDH3P22223 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDH3P22223 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDH3P22223 MIR3181-201ENST00000578512 73 ntBASIC21.56■■□□□ 1.04
CDH3P22223 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.56■■□□□ 1.04
CDH3P22223 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms