Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.94■□□□□ 0.3
RAB4AP20338 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RAB4AP20338 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
RAB4AP20338 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB4AP20338 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RAB4AP20338 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB4AP20338 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB4AP20338 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.93■□□□□ 0.3
RAB4AP20338 GUSBP5-202ENST00000510805 1989 ntBASIC16.93■□□□□ 0.3
RAB4AP20338 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB4AP20338 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB4AP20338 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.93■□□□□ 0.3
RAB4AP20338 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB4AP20338 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB4AP20338 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB4AP20338 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB4AP20338 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB4AP20338 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB4AP20338 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB4AP20338 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RAB4AP20338 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB4AP20338 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
RAB4AP20338 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB4AP20338 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB4AP20338 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB4AP20338 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RAB4AP20338 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB4AP20338 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB4AP20338 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB4AP20338 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB4AP20338 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB4AP20338 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RAB4AP20338 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB4AP20338 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB4AP20338 HLA-L-211ENST00000482052 1765 ntBASIC16.92■□□□□ 0.3
RAB4AP20338 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB4AP20338 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB4AP20338 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB4AP20338 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB4AP20338 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB4AP20338 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB4AP20338 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB4AP20338 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB4AP20338 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.91■□□□□ 0.3
RAB4AP20338 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RAB4AP20338 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RAB4AP20338 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB4AP20338 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB4AP20338 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB4AP20338 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB4AP20338 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB4AP20338 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RAB4AP20338 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB4AP20338 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RAB4AP20338 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RAB4AP20338 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB4AP20338 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RAB4AP20338 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB4AP20338 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB4AP20338 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB4AP20338 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB4AP20338 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB4AP20338 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB4AP20338 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RAB4AP20338 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB4AP20338 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB4AP20338 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RAB4AP20338 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB4AP20338 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB4AP20338 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RAB4AP20338 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RAB4AP20338 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RAB4AP20338 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB4AP20338 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RAB4AP20338 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RAB4AP20338 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
RAB4AP20338 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB4AP20338 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB4AP20338 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RAB4AP20338 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB4AP20338 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB4AP20338 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB4AP20338 DUX4L13-201ENST00000554103 1267 ntBASIC16.89■□□□□ 0.29
RAB4AP20338 DUX4L15-201ENST00000611059 1267 ntBASIC16.89■□□□□ 0.29
RAB4AP20338 DUX4L23-201ENST00000615195 1269 ntBASIC16.89■□□□□ 0.29
RAB4AP20338 DUX4L24-201ENST00000617576 1269 ntBASIC16.89■□□□□ 0.29
RAB4AP20338 DUX4L22-201ENST00000618238 1269 ntBASIC16.89■□□□□ 0.29
RAB4AP20338 DUX4L20-201ENST00000619712 1269 ntBASIC16.89■□□□□ 0.29
RAB4AP20338 DUX4L21-201ENST00000622058 1269 ntBASIC16.89■□□□□ 0.29
RAB4AP20338 DUX4L10-201ENST00000622460 1267 ntBASIC16.89■□□□□ 0.29
RAB4AP20338 DUX4L25-201ENST00000624915 1269 ntBASIC16.89■□□□□ 0.29
RAB4AP20338 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB4AP20338 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB4AP20338 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB4AP20338 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB4AP20338 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB4AP20338 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB4AP20338 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB4AP20338 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB4AP20338 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms