Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.56■■□□□ 1.36
TMEM253P0C7T8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM253P0C7T8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.55■■□□□ 1.36
TMEM253P0C7T8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.55■■□□□ 1.36
TMEM253P0C7T8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TMEM253P0C7T8 BX664725.1-201ENST00000438252 379 ntBASIC23.55■■□□□ 1.36
TMEM253P0C7T8 LINC01529-204ENST00000636474 1715 ntBASIC23.55■■□□□ 1.36
TMEM253P0C7T8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.55■■□□□ 1.36
TMEM253P0C7T8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.55■■□□□ 1.36
TMEM253P0C7T8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM253P0C7T8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 FP325331.1-202ENST00000623531 1380 ntBASIC23.54■■□□□ 1.36
TMEM253P0C7T8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TMEM253P0C7T8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM253P0C7T8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM253P0C7T8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TMEM253P0C7T8 AC087742.1-201ENST00000575880 1738 ntBASIC23.53■■□□□ 1.36
TMEM253P0C7T8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM253P0C7T8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM253P0C7T8 AC139530.1-201ENST00000575312 1977 ntBASIC23.53■■□□□ 1.36
TMEM253P0C7T8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM253P0C7T8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.53■■□□□ 1.36
TMEM253P0C7T8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
TMEM253P0C7T8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM253P0C7T8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
TMEM253P0C7T8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM253P0C7T8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM253P0C7T8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM253P0C7T8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM253P0C7T8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM253P0C7T8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM253P0C7T8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM253P0C7T8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM253P0C7T8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM253P0C7T8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.52■■□□□ 1.36
TMEM253P0C7T8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM253P0C7T8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM253P0C7T8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM253P0C7T8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.52■■□□□ 1.36
TMEM253P0C7T8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
TMEM253P0C7T8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.51■■□□□ 1.35
TMEM253P0C7T8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM253P0C7T8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM253P0C7T8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TMEM253P0C7T8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
TMEM253P0C7T8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
TMEM253P0C7T8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.51■■□□□ 1.35
TMEM253P0C7T8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM253P0C7T8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.51■■□□□ 1.35
TMEM253P0C7T8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.51■■□□□ 1.35
TMEM253P0C7T8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.51■■□□□ 1.35
TMEM253P0C7T8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM253P0C7T8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEM253P0C7T8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TMEM253P0C7T8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TMEM253P0C7T8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.5■■□□□ 1.35
TMEM253P0C7T8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TMEM253P0C7T8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEM253P0C7T8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
TMEM253P0C7T8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEM253P0C7T8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 AC137767.1-201ENST00000602918 1920 ntBASIC23.49■■□□□ 1.35
TMEM253P0C7T8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 AC080038.3-201ENST00000623346 1952 ntBASIC23.49■■□□□ 1.35
TMEM253P0C7T8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TMEM253P0C7T8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TMEM253P0C7T8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
TMEM253P0C7T8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TMEM253P0C7T8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TMEM253P0C7T8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
TMEM253P0C7T8 AC092028.1-203ENST00000608262 953 ntBASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms