Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSBP07858 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSBP07858 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.19■□□□□ 0.98
CTSBP07858 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSBP07858 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CTSBP07858 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSBP07858 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.19■□□□□ 0.98
CTSBP07858 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.19■□□□□ 0.98
CTSBP07858 AC027682.1-201ENST00000562846 899 ntBASIC21.19■□□□□ 0.98
CTSBP07858 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.19■□□□□ 0.98
CTSBP07858 AC233992.3-201ENST00000607491 485 ntBASIC21.19■□□□□ 0.98
CTSBP07858 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSBP07858 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSBP07858 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSBP07858 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSBP07858 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CTSBP07858 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSBP07858 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSBP07858 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CTSBP07858 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CTSBP07858 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.18■□□□□ 0.98
CTSBP07858 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTSBP07858 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CTSBP07858 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTSBP07858 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.18■□□□□ 0.98
CTSBP07858 BX842568.3-201ENST00000418104 571 ntBASIC21.18■□□□□ 0.98
CTSBP07858 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTSBP07858 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
CTSBP07858 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTSBP07858 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CTSBP07858 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTSBP07858 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTSBP07858 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTSBP07858 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.17■□□□□ 0.98
CTSBP07858 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.16■□□□□ 0.98
CTSBP07858 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.16■□□□□ 0.98
CTSBP07858 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.16■□□□□ 0.98
CTSBP07858 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSBP07858 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSBP07858 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.16■□□□□ 0.98
CTSBP07858 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CTSBP07858 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTSBP07858 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSBP07858 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.16■□□□□ 0.98
CTSBP07858 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTSBP07858 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSBP07858 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CTSBP07858 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSBP07858 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CTSBP07858 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSBP07858 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSBP07858 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTSBP07858 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.15■□□□□ 0.98
CTSBP07858 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTSBP07858 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTSBP07858 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSBP07858 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSBP07858 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSBP07858 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSBP07858 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CTSBP07858 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CTSBP07858 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTSBP07858 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTSBP07858 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CTSBP07858 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CTSBP07858 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.14■□□□□ 0.97
CTSBP07858 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CTSBP07858 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CTSBP07858 AC004687.1-201ENST00000579003 1625 ntBASIC21.14■□□□□ 0.97
CTSBP07858 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSBP07858 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
CTSBP07858 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSBP07858 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.13■□□□□ 0.97
CTSBP07858 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSBP07858 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSBP07858 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.13■□□□□ 0.97
CTSBP07858 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.13■□□□□ 0.97
CTSBP07858 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.13■□□□□ 0.97
CTSBP07858 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CTSBP07858 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSBP07858 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.12■□□□□ 0.97
CTSBP07858 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSBP07858 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.12■□□□□ 0.97
CTSBP07858 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTSBP07858 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSBP07858 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTSBP07858 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CTSBP07858 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSBP07858 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSBP07858 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.12■□□□□ 0.97
CTSBP07858 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSBP07858 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSBP07858 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CTSBP07858 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSBP07858 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CTSBP07858 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.12■□□□□ 0.97
CTSBP07858 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTSBP07858 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.11■□□□□ 0.97
CTSBP07858 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSBP07858 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms