Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.92■□□□□ 0.78
HLA-DPB1P04440 MIR4508-201ENST00000584178 70 ntBASIC19.92■□□□□ 0.78
HLA-DPB1P04440 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DPB1P04440 AL022069.1-201ENST00000568025 1636 ntBASIC19.91■□□□□ 0.78
HLA-DPB1P04440 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DPB1P04440 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
HLA-DPB1P04440 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.91■□□□□ 0.78
HLA-DPB1P04440 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DPB1P04440 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DPB1P04440 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DPB1P04440 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.91■□□□□ 0.78
HLA-DPB1P04440 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
HLA-DPB1P04440 AC120024.1-201ENST00000562672 995 ntBASIC19.9■□□□□ 0.78
HLA-DPB1P04440 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.9■□□□□ 0.78
HLA-DPB1P04440 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DPB1P04440 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPB1P04440 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPB1P04440 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPB1P04440 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPB1P04440 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPB1P04440 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HLA-DPB1P04440 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPB1P04440 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HLA-DPB1P04440 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
HLA-DPB1P04440 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPB1P04440 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPB1P04440 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPB1P04440 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPB1P04440 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DPB1P04440 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DPB1P04440 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HLA-DPB1P04440 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HLA-DPB1P04440 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DPB1P04440 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HLA-DPB1P04440 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPB1P04440 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPB1P04440 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DPB1P04440 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DPB1P04440 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPB1P04440 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DPB1P04440 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPB1P04440 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DPB1P04440 AC103724.3-201ENST00000564481 992 ntBASIC19.88■□□□□ 0.77
HLA-DPB1P04440 THA1P-201ENST00000590384 1145 ntBASIC19.88■□□□□ 0.77
HLA-DPB1P04440 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
HLA-DPB1P04440 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPB1P04440 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPB1P04440 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPB1P04440 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPB1P04440 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DPB1P04440 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPB1P04440 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPB1P04440 RARRES2P1-201ENST00000474487 481 ntBASIC19.87■□□□□ 0.77
HLA-DPB1P04440 AC011551.1-201ENST00000614101 683 ntBASIC19.87■□□□□ 0.77
HLA-DPB1P04440 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPB1P04440 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPB1P04440 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPB1P04440 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DPB1P04440 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPB1P04440 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HLA-DPB1P04440 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HLA-DPB1P04440 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPB1P04440 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DPB1P04440 AL137060.1-201ENST00000618151 2648 ntBASIC19.86■□□□□ 0.77
HLA-DPB1P04440 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DPB1P04440 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPB1P04440 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPB1P04440 KRT18P24-201ENST00000344739 1156 ntBASIC19.86■□□□□ 0.77
HLA-DPB1P04440 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPB1P04440 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DPB1P04440 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPB1P04440 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DPB1P04440 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
HLA-DPB1P04440 AC092053.2-201ENST00000640557 1818 ntBASIC19.86■□□□□ 0.77
HLA-DPB1P04440 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPB1P04440 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPB1P04440 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPB1P04440 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HLA-DPB1P04440 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPB1P04440 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPB1P04440 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DPB1P04440 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HLA-DPB1P04440 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPB1P04440 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DPB1P04440 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 ALDH1A3-203ENST00000557963 1670 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms