Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-ND4P03905 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-ND4P03905 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
MT-ND4P03905 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND4P03905 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-ND4P03905 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
MT-ND4P03905 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-ND4P03905 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND4P03905 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MT-ND4P03905 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND4P03905 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND4P03905 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MT-ND4P03905 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND4P03905 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND4P03905 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MT-ND4P03905 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND4P03905 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND4P03905 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND4P03905 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND4P03905 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MT-ND4P03905 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND4P03905 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MT-ND4P03905 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND4P03905 C11orf96-202ENST00000528572 1834 ntBASIC19.24■□□□□ 0.67
MT-ND4P03905 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND4P03905 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND4P03905 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND4P03905 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
MT-ND4P03905 DUX4L18-201ENST00000553347 1267 ntBASIC19.24■□□□□ 0.67
MT-ND4P03905 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND4P03905 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND4P03905 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.24■□□□□ 0.67
MT-ND4P03905 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND4P03905 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND4P03905 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND4P03905 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.24■□□□□ 0.67
MT-ND4P03905 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND4P03905 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MT-ND4P03905 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND4P03905 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND4P03905 FBXW4P1-201ENST00000426721 2239 ntBASIC19.23■□□□□ 0.67
MT-ND4P03905 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND4P03905 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND4P03905 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.23■□□□□ 0.67
MT-ND4P03905 AC019171.1-201ENST00000601251 1056 ntBASIC19.23■□□□□ 0.67
MT-ND4P03905 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MT-ND4P03905 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MT-ND4P03905 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.23■□□□□ 0.67
MT-ND4P03905 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND4P03905 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND4P03905 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND4P03905 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MT-ND4P03905 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND4P03905 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-ND4P03905 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND4P03905 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND4P03905 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND4P03905 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND4P03905 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.22■□□□□ 0.67
MT-ND4P03905 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND4P03905 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND4P03905 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.22■□□□□ 0.67
MT-ND4P03905 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MT-ND4P03905 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND4P03905 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND4P03905 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-ND4P03905 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MT-ND4P03905 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND4P03905 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
MT-ND4P03905 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND4P03905 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND4P03905 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND4P03905 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND4P03905 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND4P03905 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MT-ND4P03905 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.21■□□□□ 0.67
MT-ND4P03905 AC139795.1-202ENST00000500444 432 ntBASIC19.21■□□□□ 0.67
MT-ND4P03905 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MT-ND4P03905 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND4P03905 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.21■□□□□ 0.67
MT-ND4P03905 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND4P03905 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
MT-ND4P03905 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND4P03905 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND4P03905 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.2■□□□□ 0.66
MT-ND4P03905 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND4P03905 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND4P03905 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.2■□□□□ 0.66
MT-ND4P03905 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MT-ND4P03905 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.2■□□□□ 0.66
MT-ND4P03905 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND4P03905 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.2■□□□□ 0.66
MT-ND4P03905 AL161729.1-201ENST00000604104 1402 ntBASIC19.2■□□□□ 0.66
MT-ND4P03905 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.2■□□□□ 0.66
MT-ND4P03905 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND4P03905 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.2■□□□□ 0.66
MT-ND4P03905 AC092053.2-201ENST00000640557 1818 ntBASIC19.2■□□□□ 0.66
MT-ND4P03905 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND4P03905 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND4P03905 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms