Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CHRNA1P02708 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHRNA1P02708 AP005435.1-201ENST00000529293 1178 ntBASIC24.45■■□□□ 1.5
CHRNA1P02708 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHRNA1P02708 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.45■■□□□ 1.5
CHRNA1P02708 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
CHRNA1P02708 AC092437.1-201ENST00000624794 1048 ntBASIC24.45■■□□□ 1.5
CHRNA1P02708 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHRNA1P02708 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHRNA1P02708 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHRNA1P02708 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
CHRNA1P02708 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHRNA1P02708 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHRNA1P02708 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHRNA1P02708 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHRNA1P02708 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.44■■□□□ 1.5
CHRNA1P02708 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.44■■□□□ 1.5
CHRNA1P02708 RARRES2P11-201ENST00000635158 484 ntBASIC24.44■■□□□ 1.5
CHRNA1P02708 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.44■■□□□ 1.5
CHRNA1P02708 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHRNA1P02708 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.44■■□□□ 1.5
CHRNA1P02708 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.44■■□□□ 1.5
CHRNA1P02708 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CHRNA1P02708 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CHRNA1P02708 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CHRNA1P02708 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.43■■□□□ 1.5
CHRNA1P02708 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHRNA1P02708 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHRNA1P02708 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.43■■□□□ 1.5
CHRNA1P02708 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.43■■□□□ 1.5
CHRNA1P02708 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.43■■□□□ 1.5
CHRNA1P02708 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CHRNA1P02708 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHRNA1P02708 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.43■■□□□ 1.5
CHRNA1P02708 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHRNA1P02708 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHRNA1P02708 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.42■■□□□ 1.5
CHRNA1P02708 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.42■■□□□ 1.5
CHRNA1P02708 AL137784.2-201ENST00000607332 1000 ntBASIC24.42■■□□□ 1.5
CHRNA1P02708 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CHRNA1P02708 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CHRNA1P02708 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHRNA1P02708 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHRNA1P02708 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHRNA1P02708 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHRNA1P02708 AC090192.1-201ENST00000517740 490 ntBASIC24.41■■□□□ 1.5
CHRNA1P02708 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHRNA1P02708 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHRNA1P02708 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHRNA1P02708 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHRNA1P02708 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.4■■□□□ 1.5
CHRNA1P02708 TERF1P2-201ENST00000583350 1212 ntBASIC24.4■■□□□ 1.5
CHRNA1P02708 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.4■■□□□ 1.5
CHRNA1P02708 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHRNA1P02708 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHRNA1P02708 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHRNA1P02708 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHRNA1P02708 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHRNA1P02708 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHRNA1P02708 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHRNA1P02708 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHRNA1P02708 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CHRNA1P02708 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CHRNA1P02708 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CHRNA1P02708 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHRNA1P02708 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.39■■□□□ 1.49
CHRNA1P02708 KRT18P14-201ENST00000534205 1250 ntBASIC24.39■■□□□ 1.49
CHRNA1P02708 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.39■■□□□ 1.49
CHRNA1P02708 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CHRNA1P02708 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHRNA1P02708 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CHRNA1P02708 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHRNA1P02708 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.38■■□□□ 1.49
CHRNA1P02708 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHRNA1P02708 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.38■■□□□ 1.49
CHRNA1P02708 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.38■■□□□ 1.49
CHRNA1P02708 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHRNA1P02708 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.38■■□□□ 1.49
CHRNA1P02708 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.38■■□□□ 1.49
CHRNA1P02708 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHRNA1P02708 LINC02228-203ENST00000641970 1355 ntBASIC24.38■■□□□ 1.49
CHRNA1P02708 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.38■■□□□ 1.49
CHRNA1P02708 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CHRNA1P02708 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.37■■□□□ 1.49
CHRNA1P02708 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.37■■□□□ 1.49
CHRNA1P02708 NTF6G-201ENST00000591094 616 ntBASIC24.37■■□□□ 1.49
CHRNA1P02708 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.37■■□□□ 1.49
CHRNA1P02708 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHRNA1P02708 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHRNA1P02708 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHRNA1P02708 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHRNA1P02708 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHRNA1P02708 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.36■■□□□ 1.49
CHRNA1P02708 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.36■■□□□ 1.49
CHRNA1P02708 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.36■■□□□ 1.49
CHRNA1P02708 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHRNA1P02708 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHRNA1P02708 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHRNA1P02708 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.36■■□□□ 1.49
CHRNA1P02708 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms