Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ALDH1A1P00352 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.79■■□□□ 1.72
ALDH1A1P00352 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ALDH1A1P00352 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
ALDH1A1P00352 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ALDH1A1P00352 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ALDH1A1P00352 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ALDH1A1P00352 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.78■■□□□ 1.72
ALDH1A1P00352 KRT18P6-201ENST00000555540 1265 ntBASIC25.78■■□□□ 1.72
ALDH1A1P00352 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.78■■□□□ 1.72
ALDH1A1P00352 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ALDH1A1P00352 AC092803.2-201ENST00000564287 1899 ntBASIC25.77■■□□□ 1.72
ALDH1A1P00352 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.77■■□□□ 1.72
ALDH1A1P00352 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
ALDH1A1P00352 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.77■■□□□ 1.72
ALDH1A1P00352 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.77■■□□□ 1.72
ALDH1A1P00352 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.77■■□□□ 1.72
ALDH1A1P00352 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ALDH1A1P00352 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
ALDH1A1P00352 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.77■■□□□ 1.72
ALDH1A1P00352 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ALDH1A1P00352 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.77■■□□□ 1.72
ALDH1A1P00352 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
ALDH1A1P00352 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ALDH1A1P00352 AL121832.2-201ENST00000610979 668 ntBASIC25.76■■□□□ 1.71
ALDH1A1P00352 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
ALDH1A1P00352 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
ALDH1A1P00352 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.76■■□□□ 1.71
ALDH1A1P00352 BX005040.4-201ENST00000637145 1518 ntBASIC25.76■■□□□ 1.71
ALDH1A1P00352 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
ALDH1A1P00352 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
ALDH1A1P00352 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ALDH1A1P00352 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
ALDH1A1P00352 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ALDH1A1P00352 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.75■■□□□ 1.71
ALDH1A1P00352 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ALDH1A1P00352 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ALDH1A1P00352 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.75■■□□□ 1.71
ALDH1A1P00352 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.75■■□□□ 1.71
ALDH1A1P00352 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ALDH1A1P00352 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.75■■□□□ 1.71
ALDH1A1P00352 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ALDH1A1P00352 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ALDH1A1P00352 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
ALDH1A1P00352 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ALDH1A1P00352 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25.74■■□□□ 1.71
ALDH1A1P00352 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
ALDH1A1P00352 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ALDH1A1P00352 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.74■■□□□ 1.71
ALDH1A1P00352 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ALDH1A1P00352 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
ALDH1A1P00352 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
ALDH1A1P00352 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.73■■□□□ 1.71
ALDH1A1P00352 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.73■■□□□ 1.71
ALDH1A1P00352 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.73■■□□□ 1.71
ALDH1A1P00352 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
ALDH1A1P00352 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.73■■□□□ 1.71
ALDH1A1P00352 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
ALDH1A1P00352 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ALDH1A1P00352 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.72■■□□□ 1.71
ALDH1A1P00352 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
ALDH1A1P00352 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.72■■□□□ 1.71
ALDH1A1P00352 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.72■■□□□ 1.71
ALDH1A1P00352 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.72■■□□□ 1.71
ALDH1A1P00352 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ALDH1A1P00352 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
ALDH1A1P00352 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.71■■□□□ 1.71
ALDH1A1P00352 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ALDH1A1P00352 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ALDH1A1P00352 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
ALDH1A1P00352 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
ALDH1A1P00352 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
ALDH1A1P00352 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ALDH1A1P00352 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ALDH1A1P00352 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ALDH1A1P00352 TSPY6P-201ENST00000448518 926 ntBASIC25.7■■□□□ 1.7
ALDH1A1P00352 AC083906.2-201ENST00000511578 360 ntBASIC25.7■■□□□ 1.7
ALDH1A1P00352 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.7■■□□□ 1.7
ALDH1A1P00352 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.7■■□□□ 1.7
ALDH1A1P00352 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ALDH1A1P00352 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.7
ALDH1A1P00352 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
ALDH1A1P00352 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ALDH1A1P00352 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ALDH1A1P00352 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.69■■□□□ 1.7
ALDH1A1P00352 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.69■■□□□ 1.7
ALDH1A1P00352 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.69■■□□□ 1.7
ALDH1A1P00352 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ALDH1A1P00352 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ALDH1A1P00352 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.68■■□□□ 1.7
ALDH1A1P00352 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.68■■□□□ 1.7
ALDH1A1P00352 FAM201B-201ENST00000458407 597 ntBASIC25.68■■□□□ 1.7
ALDH1A1P00352 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
ALDH1A1P00352 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ALDH1A1P00352 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.68■■□□□ 1.7
ALDH1A1P00352 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ALDH1A1P00352 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.67■■□□□ 1.7
ALDH1A1P00352 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ALDH1A1P00352 HLA-L-211ENST00000482052 1765 ntBASIC25.67■■□□□ 1.7
ALDH1A1P00352 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms