Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.41■□□□□ 0.7
SMPD2O60906 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.41■□□□□ 0.7
SMPD2O60906 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.41■□□□□ 0.7
SMPD2O60906 AC241377.3-202ENST00000626088 1088 ntBASIC19.41■□□□□ 0.7
SMPD2O60906 AC241585.3-202ENST00000628937 1088 ntBASIC19.41■□□□□ 0.7
SMPD2O60906 AC245100.8-202ENST00000629247 1058 ntBASIC19.41■□□□□ 0.7
SMPD2O60906 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMPD2O60906 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SMPD2O60906 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SMPD2O60906 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD2O60906 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD2O60906 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SMPD2O60906 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD2O60906 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
SMPD2O60906 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.4■□□□□ 0.7
SMPD2O60906 C17orf82-201ENST00000623772 1530 ntBASIC19.4■□□□□ 0.7
SMPD2O60906 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMPD2O60906 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMPD2O60906 ANOS2P-203ENST00000472227 1816 ntBASIC19.39■□□□□ 0.7
SMPD2O60906 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.39■□□□□ 0.7
SMPD2O60906 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.39■□□□□ 0.69
SMPD2O60906 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.39■□□□□ 0.69
SMPD2O60906 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.39■□□□□ 0.69
SMPD2O60906 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD2O60906 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SMPD2O60906 AC079630.1-202ENST00000618127 1840 ntBASIC19.39■□□□□ 0.69
SMPD2O60906 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.39■□□□□ 0.69
SMPD2O60906 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMPD2O60906 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.39■□□□□ 0.69
SMPD2O60906 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.39■□□□□ 0.69
SMPD2O60906 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.39■□□□□ 0.69
SMPD2O60906 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.39■□□□□ 0.69
SMPD2O60906 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD2O60906 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD2O60906 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.38■□□□□ 0.69
SMPD2O60906 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMPD2O60906 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.38■□□□□ 0.69
SMPD2O60906 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SMPD2O60906 AC136469.2-201ENST00000623944 1028 ntBASIC19.38■□□□□ 0.69
SMPD2O60906 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.37■□□□□ 0.69
SMPD2O60906 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SMPD2O60906 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD2O60906 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD2O60906 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.37■□□□□ 0.69
SMPD2O60906 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD2O60906 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.37■□□□□ 0.69
SMPD2O60906 AC233992.3-201ENST00000607491 485 ntBASIC19.37■□□□□ 0.69
SMPD2O60906 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD2O60906 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMPD2O60906 AC144652.1-201ENST00000609974 1624 ntBASIC19.36■□□□□ 0.69
SMPD2O60906 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.36■□□□□ 0.69
SMPD2O60906 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.36■□□□□ 0.69
SMPD2O60906 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.36■□□□□ 0.69
SMPD2O60906 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD2O60906 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD2O60906 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.36■□□□□ 0.69
SMPD2O60906 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD2O60906 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD2O60906 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD2O60906 AC092068.2-201ENST00000590491 1708 ntBASIC19.36■□□□□ 0.69
SMPD2O60906 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMPD2O60906 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.36■□□□□ 0.69
SMPD2O60906 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.36■□□□□ 0.69
SMPD2O60906 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD2O60906 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD2O60906 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD2O60906 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SMPD2O60906 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD2O60906 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMPD2O60906 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.35■□□□□ 0.69
SMPD2O60906 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.35■□□□□ 0.69
SMPD2O60906 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SMPD2O60906 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.35■□□□□ 0.69
SMPD2O60906 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD2O60906 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD2O60906 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD2O60906 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD2O60906 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.34■□□□□ 0.69
SMPD2O60906 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.34■□□□□ 0.69
SMPD2O60906 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD2O60906 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.34■□□□□ 0.69
SMPD2O60906 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.34■□□□□ 0.69
SMPD2O60906 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.34■□□□□ 0.69
SMPD2O60906 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SMPD2O60906 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.34■□□□□ 0.69
SMPD2O60906 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMPD2O60906 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMPD2O60906 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMPD2O60906 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.33■□□□□ 0.69
SMPD2O60906 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMPD2O60906 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMPD2O60906 BX842568.3-201ENST00000418104 571 ntBASIC19.33■□□□□ 0.68
SMPD2O60906 AC034268.1-201ENST00000441047 882 ntBASIC19.33■□□□□ 0.68
SMPD2O60906 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.33■□□□□ 0.68
SMPD2O60906 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.33■□□□□ 0.68
SMPD2O60906 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMPD2O60906 AC009086.3-201ENST00000623486 1008 ntBASIC19.33■□□□□ 0.68
SMPD2O60906 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SMPD2O60906 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.33■□□□□ 0.68
SMPD2O60906 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms