Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.08■■□□□ 1.29
OPHN1O60890 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
OPHN1O60890 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
OPHN1O60890 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
OPHN1O60890 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
OPHN1O60890 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
OPHN1O60890 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
OPHN1O60890 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
OPHN1O60890 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
OPHN1O60890 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
OPHN1O60890 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
OPHN1O60890 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
OPHN1O60890 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
OPHN1O60890 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
OPHN1O60890 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
OPHN1O60890 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
OPHN1O60890 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.06■■□□□ 1.28
OPHN1O60890 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
OPHN1O60890 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
OPHN1O60890 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.06■■□□□ 1.28
OPHN1O60890 SUDS3P1-201ENST00000505831 966 ntBASIC23.06■■□□□ 1.28
OPHN1O60890 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.06■■□□□ 1.28
OPHN1O60890 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.06■■□□□ 1.28
OPHN1O60890 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.06■■□□□ 1.28
OPHN1O60890 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
OPHN1O60890 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
OPHN1O60890 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.06■■□□□ 1.28
OPHN1O60890 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
OPHN1O60890 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
OPHN1O60890 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
OPHN1O60890 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
OPHN1O60890 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
OPHN1O60890 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.05■■□□□ 1.28
OPHN1O60890 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.05■■□□□ 1.28
OPHN1O60890 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
OPHN1O60890 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
OPHN1O60890 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.05■■□□□ 1.28
OPHN1O60890 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
OPHN1O60890 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.05■■□□□ 1.28
OPHN1O60890 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
OPHN1O60890 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.05■■□□□ 1.28
OPHN1O60890 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.05■■□□□ 1.28
OPHN1O60890 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
OPHN1O60890 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
OPHN1O60890 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
OPHN1O60890 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
OPHN1O60890 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
OPHN1O60890 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
OPHN1O60890 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
OPHN1O60890 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
OPHN1O60890 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
OPHN1O60890 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
OPHN1O60890 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
OPHN1O60890 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
OPHN1O60890 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
OPHN1O60890 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.04■■□□□ 1.28
OPHN1O60890 AL031432.3-201ENST00000607698 485 ntBASIC23.04■■□□□ 1.28
OPHN1O60890 MIR6722-201ENST00000617286 78 ntBASIC23.04■■□□□ 1.28
OPHN1O60890 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.04■■□□□ 1.28
OPHN1O60890 C9orf163-202ENST00000624034 2573 ntBASIC23.04■■□□□ 1.28
OPHN1O60890 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
OPHN1O60890 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
OPHN1O60890 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
OPHN1O60890 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.03■■□□□ 1.28
OPHN1O60890 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
OPHN1O60890 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.03■■□□□ 1.28
OPHN1O60890 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
OPHN1O60890 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
OPHN1O60890 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.03■■□□□ 1.28
OPHN1O60890 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
OPHN1O60890 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
OPHN1O60890 EDA-201ENST00000338901 1233 ntBASIC23.03■■□□□ 1.28
OPHN1O60890 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.03■■□□□ 1.28
OPHN1O60890 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.03■■□□□ 1.28
OPHN1O60890 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
OPHN1O60890 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.03■■□□□ 1.28
OPHN1O60890 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
OPHN1O60890 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.03■■□□□ 1.28
OPHN1O60890 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.02■■□□□ 1.28
OPHN1O60890 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
OPHN1O60890 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.02■■□□□ 1.28
OPHN1O60890 SRD5A1P1-201ENST00000442297 786 ntBASIC23.02■■□□□ 1.28
OPHN1O60890 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.02■■□□□ 1.28
OPHN1O60890 AL355001.2-201ENST00000620617 1191 ntBASIC23.02■■□□□ 1.28
OPHN1O60890 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.02■■□□□ 1.28
OPHN1O60890 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
OPHN1O60890 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
OPHN1O60890 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.01■■□□□ 1.27
OPHN1O60890 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.01■■□□□ 1.27
OPHN1O60890 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.01■■□□□ 1.27
OPHN1O60890 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
OPHN1O60890 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.01■■□□□ 1.27
OPHN1O60890 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.01■■□□□ 1.27
OPHN1O60890 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
OPHN1O60890 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.01■■□□□ 1.27
OPHN1O60890 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.01■■□□□ 1.27
OPHN1O60890 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
OPHN1O60890 AC079834.2-201ENST00000609776 1949 ntBASIC23.01■■□□□ 1.27
OPHN1O60890 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
OPHN1O60890 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms