Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF2O60811 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF2O60811 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
PRAMEF2O60811 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PRAMEF2O60811 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PRAMEF2O60811 FP325331.1-202ENST00000623531 1380 ntBASIC20.84■□□□□ 0.93
PRAMEF2O60811 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEF2O60811 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEF2O60811 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEF2O60811 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.83■□□□□ 0.93
PRAMEF2O60811 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PRAMEF2O60811 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRAMEF2O60811 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.83■□□□□ 0.92
PRAMEF2O60811 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRAMEF2O60811 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.83■□□□□ 0.92
PRAMEF2O60811 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRAMEF2O60811 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.83■□□□□ 0.92
PRAMEF2O60811 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRAMEF2O60811 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRAMEF2O60811 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRAMEF2O60811 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF2O60811 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
PRAMEF2O60811 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PRAMEF2O60811 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF2O60811 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF2O60811 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.82■□□□□ 0.92
PRAMEF2O60811 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.82■□□□□ 0.92
PRAMEF2O60811 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF2O60811 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF2O60811 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF2O60811 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF2O60811 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF2O60811 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF2O60811 LINC01529-204ENST00000636474 1715 ntBASIC20.81■□□□□ 0.92
PRAMEF2O60811 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF2O60811 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF2O60811 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF2O60811 SERBP1P1-201ENST00000396021 1160 ntBASIC20.81■□□□□ 0.92
PRAMEF2O60811 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.81■□□□□ 0.92
PRAMEF2O60811 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.81■□□□□ 0.92
PRAMEF2O60811 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.81■□□□□ 0.92
PRAMEF2O60811 AF213884.3-201ENST00000563833 479 ntBASIC20.81■□□□□ 0.92
PRAMEF2O60811 AL136967.2-201ENST00000623968 743 ntBASIC20.81■□□□□ 0.92
PRAMEF2O60811 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.81■□□□□ 0.92
PRAMEF2O60811 DUSP8P3-201ENST00000399571 1760 ntBASIC20.81■□□□□ 0.92
PRAMEF2O60811 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.81■□□□□ 0.92
PRAMEF2O60811 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF2O60811 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF2O60811 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF2O60811 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.81■□□□□ 0.92
PRAMEF2O60811 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF2O60811 AL353803.4-201ENST00000565882 1934 ntBASIC20.8■□□□□ 0.92
PRAMEF2O60811 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PRAMEF2O60811 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.8■□□□□ 0.92
PRAMEF2O60811 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PRAMEF2O60811 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.8■□□□□ 0.92
PRAMEF2O60811 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF2O60811 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.8■□□□□ 0.92
PRAMEF2O60811 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF2O60811 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.8■□□□□ 0.92
PRAMEF2O60811 MIR4767-201ENST00000582827 78 ntBASIC20.8■□□□□ 0.92
PRAMEF2O60811 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PRAMEF2O60811 AL138724.1-201ENST00000606771 1088 ntBASIC20.8■□□□□ 0.92
PRAMEF2O60811 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.8■□□□□ 0.92
PRAMEF2O60811 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.8■□□□□ 0.92
PRAMEF2O60811 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.8■□□□□ 0.92
PRAMEF2O60811 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF2O60811 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEF2O60811 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
PRAMEF2O60811 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PRAMEF2O60811 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEF2O60811 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.79■□□□□ 0.92
PRAMEF2O60811 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEF2O60811 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.79■□□□□ 0.92
PRAMEF2O60811 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEF2O60811 MIR939-201ENST00000401314 82 ntBASIC20.79■□□□□ 0.92
PRAMEF2O60811 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.79■□□□□ 0.92
PRAMEF2O60811 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.79■□□□□ 0.92
PRAMEF2O60811 AP001330.3-201ENST00000520123 633 ntBASIC20.79■□□□□ 0.92
PRAMEF2O60811 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEF2O60811 AC241377.3-202ENST00000626088 1088 ntBASIC20.79■□□□□ 0.92
PRAMEF2O60811 AC241585.3-202ENST00000628937 1088 ntBASIC20.79■□□□□ 0.92
PRAMEF2O60811 AC245100.8-202ENST00000629247 1058 ntBASIC20.79■□□□□ 0.92
PRAMEF2O60811 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEF2O60811 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PRAMEF2O60811 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PRAMEF2O60811 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.78■□□□□ 0.92
PRAMEF2O60811 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.78■□□□□ 0.92
PRAMEF2O60811 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF2O60811 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PRAMEF2O60811 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PRAMEF2O60811 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF2O60811 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
PRAMEF2O60811 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.78■□□□□ 0.92
PRAMEF2O60811 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.78■□□□□ 0.92
PRAMEF2O60811 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PRAMEF2O60811 AC011298.3-201ENST00000615796 283 ntBASIC20.78■□□□□ 0.92
PRAMEF2O60811 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF2O60811 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PRAMEF2O60811 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms