Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX4O60224 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20■□□□□ 0.79
SSX4O60224 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSX4O60224 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20■□□□□ 0.79
SSX4O60224 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX4O60224 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSX4O60224 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX4O60224 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSX4O60224 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX4O60224 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SSX4O60224 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX4O60224 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSX4O60224 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
SSX4O60224 AL121603.2-201ENST00000557373 2117 ntBASIC19.99■□□□□ 0.79
SSX4O60224 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SSX4O60224 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SSX4O60224 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX4O60224 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.99■□□□□ 0.79
SSX4O60224 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSX4O60224 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSX4O60224 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX4O60224 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX4O60224 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SSX4O60224 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX4O60224 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
SSX4O60224 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
SSX4O60224 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX4O60224 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.98■□□□□ 0.79
SSX4O60224 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX4O60224 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX4O60224 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.98■□□□□ 0.79
SSX4O60224 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.98■□□□□ 0.79
SSX4O60224 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.98■□□□□ 0.79
SSX4O60224 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.98■□□□□ 0.79
SSX4O60224 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX4O60224 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX4O60224 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SSX4O60224 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.98■□□□□ 0.79
SSX4O60224 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX4O60224 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX4O60224 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.98■□□□□ 0.79
SSX4O60224 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.97■□□□□ 0.79
SSX4O60224 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX4O60224 AC073130.3-201ENST00000624389 2278 ntBASIC19.97■□□□□ 0.79
SSX4O60224 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.97■□□□□ 0.79
SSX4O60224 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX4O60224 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.97■□□□□ 0.79
SSX4O60224 MTDHP2-201ENST00000601468 714 ntBASIC19.97■□□□□ 0.79
SSX4O60224 AC010997.5-201ENST00000609182 354 ntBASIC19.97■□□□□ 0.79
SSX4O60224 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SSX4O60224 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.97■□□□□ 0.79
SSX4O60224 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSX4O60224 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX4O60224 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX4O60224 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSX4O60224 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.97■□□□□ 0.79
SSX4O60224 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX4O60224 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.97■□□□□ 0.79
SSX4O60224 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX4O60224 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX4O60224 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SSX4O60224 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX4O60224 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SSX4O60224 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX4O60224 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSX4O60224 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.96■□□□□ 0.79
SSX4O60224 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.96■□□□□ 0.79
SSX4O60224 AC011551.1-201ENST00000614101 683 ntBASIC19.96■□□□□ 0.79
SSX4O60224 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SSX4O60224 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX4O60224 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX4O60224 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.96■□□□□ 0.79
SSX4O60224 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SSX4O60224 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.95■□□□□ 0.78
SSX4O60224 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX4O60224 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSX4O60224 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX4O60224 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.95■□□□□ 0.78
SSX4O60224 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX4O60224 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX4O60224 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SSX4O60224 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX4O60224 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.95■□□□□ 0.78
SSX4O60224 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSX4O60224 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.94■□□□□ 0.78
SSX4O60224 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSX4O60224 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSX4O60224 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SSX4O60224 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSX4O60224 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSX4O60224 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SSX4O60224 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSX4O60224 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSX4O60224 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSX4O60224 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX4O60224 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX4O60224 RNF165-205ENST00000588679 2904 ntBASIC19.93■□□□□ 0.78
SSX4O60224 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX4O60224 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.93■□□□□ 0.78
SSX4O60224 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms