Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRAF3IP2O43734 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 AC133561.1-201ENST00000568600 2415 ntBASIC19.81■□□□□ 0.76
TRAF3IP2O43734 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF3IP2O43734 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP2O43734 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TRAF3IP2O43734 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.8■□□□□ 0.76
TRAF3IP2O43734 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAF3IP2O43734 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
TRAF3IP2O43734 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP2O43734 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TRAF3IP2O43734 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAF3IP2O43734 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.8■□□□□ 0.76
TRAF3IP2O43734 AC131281.2-201ENST00000520478 145 ntBASIC19.8■□□□□ 0.76
TRAF3IP2O43734 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF3IP2O43734 AC012676.1-201ENST00000574705 1949 ntBASIC19.8■□□□□ 0.76
TRAF3IP2O43734 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAF3IP2O43734 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP2O43734 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAF3IP2O43734 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRAF3IP2O43734 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRAF3IP2O43734 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP2O43734 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP2O43734 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.79■□□□□ 0.76
TRAF3IP2O43734 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAF3IP2O43734 MIR4466-201ENST00000606121 54 ntBASIC19.79■□□□□ 0.76
TRAF3IP2O43734 AC241377.3-202ENST00000626088 1088 ntBASIC19.79■□□□□ 0.76
TRAF3IP2O43734 AC241585.3-202ENST00000628937 1088 ntBASIC19.79■□□□□ 0.76
TRAF3IP2O43734 AC245100.8-202ENST00000629247 1058 ntBASIC19.79■□□□□ 0.76
TRAF3IP2O43734 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAF3IP2O43734 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRAF3IP2O43734 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRAF3IP2O43734 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF3IP2O43734 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP2O43734 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP2O43734 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP2O43734 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP2O43734 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAF3IP2O43734 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP2O43734 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP2O43734 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAF3IP2O43734 AC009086.3-201ENST00000623486 1008 ntBASIC19.78■□□□□ 0.76
TRAF3IP2O43734 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP2O43734 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF3IP2O43734 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAF3IP2O43734 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAF3IP2O43734 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAF3IP2O43734 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TRAF3IP2O43734 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAF3IP2O43734 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAF3IP2O43734 SRD5A1P1-201ENST00000442297 786 ntBASIC19.77■□□□□ 0.76
TRAF3IP2O43734 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAF3IP2O43734 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.77■□□□□ 0.76
TRAF3IP2O43734 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAF3IP2O43734 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF3IP2O43734 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAF3IP2O43734 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
TRAF3IP2O43734 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRAF3IP2O43734 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRAF3IP2O43734 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
TRAF3IP2O43734 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRAF3IP2O43734 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRAF3IP2O43734 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF3IP2O43734 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRAF3IP2O43734 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF3IP2O43734 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF3IP2O43734 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAF3IP2O43734 AC006455.2-201ENST00000429931 906 ntBASIC19.76■□□□□ 0.75
TRAF3IP2O43734 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRAF3IP2O43734 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.76■□□□□ 0.75
TRAF3IP2O43734 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF3IP2O43734 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF3IP2O43734 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
TRAF3IP2O43734 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF3IP2O43734 AC099791.2-201ENST00000605725 427 ntBASIC19.76■□□□□ 0.75
TRAF3IP2O43734 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF3IP2O43734 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.76■□□□□ 0.75
TRAF3IP2O43734 C1orf229-201ENST00000623686 2258 ntBASIC19.76■□□□□ 0.75
TRAF3IP2O43734 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAF3IP2O43734 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAF3IP2O43734 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAF3IP2O43734 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAF3IP2O43734 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRAF3IP2O43734 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAF3IP2O43734 AC131212.1-201ENST00000613771 668 ntBASIC19.75■□□□□ 0.75
TRAF3IP2O43734 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms