Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
FOXN1O15353 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.86
FOXN1O15353 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC26.64■■□□□ 1.86
FOXN1O15353 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
FOXN1O15353 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
FOXN1O15353 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
FOXN1O15353 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
FOXN1O15353 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
FOXN1O15353 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.63■■□□□ 1.85
FOXN1O15353 GPX1P1-201ENST00000388829 606 ntBASIC26.63■■□□□ 1.85
FOXN1O15353 AC142086.2-201ENST00000569753 217 ntBASIC26.63■■□□□ 1.85
FOXN1O15353 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.63■■□□□ 1.85
FOXN1O15353 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
FOXN1O15353 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
FOXN1O15353 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
FOXN1O15353 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
FOXN1O15353 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
FOXN1O15353 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
FOXN1O15353 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
FOXN1O15353 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
FOXN1O15353 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
FOXN1O15353 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
FOXN1O15353 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
FOXN1O15353 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
FOXN1O15353 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.61■■□□□ 1.85
FOXN1O15353 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
FOXN1O15353 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
FOXN1O15353 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
FOXN1O15353 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
FOXN1O15353 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC26.61■■□□□ 1.85
FOXN1O15353 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
FOXN1O15353 FAM201B-201ENST00000458407 597 ntBASIC26.61■■□□□ 1.85
FOXN1O15353 IGHV3-19-201ENST00000521488 291 ntBASIC26.61■■□□□ 1.85
FOXN1O15353 BID-214ENST00000617586 542 ntTSL 5 BASIC26.61■■□□□ 1.85
FOXN1O15353 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.61■■□□□ 1.85
FOXN1O15353 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.61■■□□□ 1.85
FOXN1O15353 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
FOXN1O15353 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
FOXN1O15353 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
FOXN1O15353 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.6■■□□□ 1.85
FOXN1O15353 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.6■■□□□ 1.85
FOXN1O15353 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
FOXN1O15353 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
FOXN1O15353 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.6■■□□□ 1.85
FOXN1O15353 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.6■■□□□ 1.85
FOXN1O15353 AC087239.1-201ENST00000622671 572 ntBASIC26.6■■□□□ 1.85
FOXN1O15353 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.6■■□□□ 1.85
FOXN1O15353 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
FOXN1O15353 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
FOXN1O15353 C17orf82-201ENST00000623772 1530 ntBASIC26.6■■□□□ 1.85
FOXN1O15353 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
FOXN1O15353 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
FOXN1O15353 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.59■■□□□ 1.85
FOXN1O15353 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.59■■□□□ 1.85
FOXN1O15353 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.59■■□□□ 1.85
FOXN1O15353 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
FOXN1O15353 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.59■■□□□ 1.85
FOXN1O15353 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC26.59■■□□□ 1.85
FOXN1O15353 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.59■■□□□ 1.85
FOXN1O15353 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
FOXN1O15353 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
FOXN1O15353 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
FOXN1O15353 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
FOXN1O15353 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
FOXN1O15353 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
FOXN1O15353 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
FOXN1O15353 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
FOXN1O15353 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
FOXN1O15353 AC009086.3-201ENST00000623486 1008 ntBASIC26.58■■□□□ 1.85
FOXN1O15353 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
FOXN1O15353 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.58■■□□□ 1.85
FOXN1O15353 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.58■■□□□ 1.85
FOXN1O15353 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
FOXN1O15353 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
FOXN1O15353 LINC01124-201ENST00000409786 2117 ntBASIC26.57■■□□□ 1.84
FOXN1O15353 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.57■■□□□ 1.84
FOXN1O15353 MIR663A-201ENST00000385250 93 ntBASIC26.57■■□□□ 1.84
FOXN1O15353 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.57■■□□□ 1.84
FOXN1O15353 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
FOXN1O15353 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.57■■□□□ 1.84
FOXN1O15353 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.57■■□□□ 1.84
FOXN1O15353 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.57■■□□□ 1.84
FOXN1O15353 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
FOXN1O15353 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
FOXN1O15353 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FOXN1O15353 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.56■■□□□ 1.84
FOXN1O15353 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FOXN1O15353 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.56■■□□□ 1.84
FOXN1O15353 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
FOXN1O15353 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FOXN1O15353 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FOXN1O15353 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FOXN1O15353 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
FOXN1O15353 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FOXN1O15353 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FOXN1O15353 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FOXN1O15353 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
FOXN1O15353 AP003733.4-201ENST00000623785 1697 ntBASIC26.55■■□□□ 1.84
FOXN1O15353 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
FOXN1O15353 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms