Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH17O14917 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH17O14917 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDH17O14917 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDH17O14917 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH17O14917 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH17O14917 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH17O14917 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDH17O14917 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDH17O14917 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH17O14917 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDH17O14917 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDH17O14917 AC011298.3-201ENST00000615796 283 ntBASIC21.15■□□□□ 0.98
PCDH17O14917 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH17O14917 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH17O14917 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH17O14917 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
PCDH17O14917 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDH17O14917 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDH17O14917 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH17O14917 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH17O14917 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PCDH17O14917 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH17O14917 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH17O14917 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PCDH17O14917 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH17O14917 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDH17O14917 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDH17O14917 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH17O14917 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH17O14917 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH17O14917 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH17O14917 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH17O14917 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH17O14917 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH17O14917 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
PCDH17O14917 AL355001.2-201ENST00000620617 1191 ntBASIC21.13■□□□□ 0.97
PCDH17O14917 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDH17O14917 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH17O14917 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH17O14917 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PCDH17O14917 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
PCDH17O14917 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH17O14917 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH17O14917 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH17O14917 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH17O14917 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH17O14917 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH17O14917 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH17O14917 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH17O14917 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH17O14917 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH17O14917 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH17O14917 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH17O14917 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH17O14917 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDH17O14917 AC099791.2-201ENST00000605725 427 ntBASIC21.12■□□□□ 0.97
PCDH17O14917 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDH17O14917 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PCDH17O14917 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH17O14917 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH17O14917 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PCDH17O14917 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH17O14917 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH17O14917 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH17O14917 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH17O14917 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH17O14917 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PCDH17O14917 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH17O14917 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH17O14917 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDH17O14917 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH17O14917 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH17O14917 AC024257.2-201ENST00000549699 147 ntBASIC21.11■□□□□ 0.97
PCDH17O14917 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH17O14917 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH17O14917 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH17O14917 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH17O14917 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH17O14917 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PCDH17O14917 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH17O14917 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDH17O14917 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH17O14917 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH17O14917 ANOS2P-203ENST00000472227 1816 ntBASIC21.1■□□□□ 0.97
PCDH17O14917 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH17O14917 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDH17O14917 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH17O14917 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH17O14917 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH17O14917 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
PCDH17O14917 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH17O14917 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH17O14917 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH17O14917 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDH17O14917 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH17O14917 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDH17O14917 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH17O14917 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDH17O14917 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms