Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP3D1O14617 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP3D1O14617 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AP3D1O14617 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.68■□□□□ 0.9
AP3D1O14617 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.68■□□□□ 0.9
AP3D1O14617 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AP3D1O14617 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP3D1O14617 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.68■□□□□ 0.9
AP3D1O14617 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP3D1O14617 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
AP3D1O14617 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.68■□□□□ 0.9
AP3D1O14617 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
AP3D1O14617 AC079630.1-202ENST00000618127 1840 ntBASIC20.67■□□□□ 0.9
AP3D1O14617 AL117328.2-201ENST00000624617 1940 ntBASIC20.67■□□□□ 0.9
AP3D1O14617 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AP3D1O14617 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.67■□□□□ 0.9
AP3D1O14617 AC239859.2-201ENST00000444165 318 ntBASIC20.67■□□□□ 0.9
AP3D1O14617 KRT125P-201ENST00000546827 989 ntBASIC20.67■□□□□ 0.9
AP3D1O14617 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.67■□□□□ 0.9
AP3D1O14617 C1orf229-201ENST00000623686 2258 ntBASIC20.67■□□□□ 0.9
AP3D1O14617 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.67■□□□□ 0.9
AP3D1O14617 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.67■□□□□ 0.9
AP3D1O14617 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AP3D1O14617 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP3D1O14617 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.67■□□□□ 0.9
AP3D1O14617 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP3D1O14617 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3D1O14617 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
AP3D1O14617 Z92544.1-202ENST00000571933 1220 ntBASIC20.66■□□□□ 0.9
AP3D1O14617 AC092028.1-203ENST00000608262 953 ntBASIC20.66■□□□□ 0.9
AP3D1O14617 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3D1O14617 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
AP3D1O14617 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.66■□□□□ 0.9
AP3D1O14617 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3D1O14617 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3D1O14617 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3D1O14617 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3D1O14617 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.66■□□□□ 0.9
AP3D1O14617 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
AP3D1O14617 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
AP3D1O14617 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.65■□□□□ 0.9
AP3D1O14617 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3D1O14617 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
AP3D1O14617 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3D1O14617 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.65■□□□□ 0.9
AP3D1O14617 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
AP3D1O14617 MIR4787-201ENST00000607364 84 ntBASIC20.65■□□□□ 0.9
AP3D1O14617 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.65■□□□□ 0.9
AP3D1O14617 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.65■□□□□ 0.9
AP3D1O14617 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP3D1O14617 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
AP3D1O14617 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
AP3D1O14617 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
AP3D1O14617 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.64■□□□□ 0.9
AP3D1O14617 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
AP3D1O14617 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP3D1O14617 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
AP3D1O14617 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3D1O14617 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3D1O14617 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3D1O14617 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.64■□□□□ 0.89
AP3D1O14617 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3D1O14617 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP3D1O14617 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP3D1O14617 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP3D1O14617 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP3D1O14617 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3D1O14617 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
AP3D1O14617 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
AP3D1O14617 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3D1O14617 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3D1O14617 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3D1O14617 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.63■□□□□ 0.89
AP3D1O14617 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.63■□□□□ 0.89
AP3D1O14617 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3D1O14617 LINC00565-201ENST00000562710 2331 ntBASIC20.63■□□□□ 0.89
AP3D1O14617 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3D1O14617 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.63■□□□□ 0.89
AP3D1O14617 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3D1O14617 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3D1O14617 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AP3D1O14617 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
AP3D1O14617 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3D1O14617 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3D1O14617 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP3D1O14617 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP3D1O14617 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.62■□□□□ 0.89
AP3D1O14617 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.62■□□□□ 0.89
AP3D1O14617 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3D1O14617 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3D1O14617 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP3D1O14617 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3D1O14617 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.62■□□□□ 0.89
AP3D1O14617 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.62■□□□□ 0.89
AP3D1O14617 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
AP3D1O14617 MIR6722-201ENST00000617286 78 ntBASIC20.62■□□□□ 0.89
AP3D1O14617 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.62■□□□□ 0.89
AP3D1O14617 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3D1O14617 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP3D1O14617 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms