Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC38.77■■■■□ 3.8
CUX2O14529 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC38.77■■■■□ 3.8
CUX2O14529 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC38.77■■■■□ 3.8
CUX2O14529 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC38.77■■■■□ 3.8
CUX2O14529 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
CUX2O14529 AC005181.1-201ENST00000604782 1256 ntBASIC38.77■■■■□ 3.8
CUX2O14529 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
CUX2O14529 OR2I1P-207ENST00000453522 948 ntBASIC38.76■■■■□ 3.8
CUX2O14529 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC38.76■■■■□ 3.79
CUX2O14529 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
CUX2O14529 SLC7A5P1-201ENST00000568957 537 ntBASIC38.75■■■■□ 3.79
CUX2O14529 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC38.75■■■■□ 3.79
CUX2O14529 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
CUX2O14529 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
CUX2O14529 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC38.73■■■■□ 3.79
CUX2O14529 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
CUX2O14529 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC38.73■■■■□ 3.79
CUX2O14529 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
CUX2O14529 AC010525.1-201ENST00000585559 441 ntBASIC38.73■■■■□ 3.79
CUX2O14529 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC38.73■■■■□ 3.79
CUX2O14529 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
CUX2O14529 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
CUX2O14529 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC38.73■■■■□ 3.79
CUX2O14529 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC38.73■■■■□ 3.79
CUX2O14529 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
CUX2O14529 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
CUX2O14529 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
CUX2O14529 RNA5SP413-201ENST00000516373 109 ntBASIC38.71■■■■□ 3.79
CUX2O14529 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC38.71■■■■□ 3.79
CUX2O14529 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
CUX2O14529 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
CUX2O14529 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC38.7■■■■□ 3.79
CUX2O14529 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC38.7■■■■□ 3.79
CUX2O14529 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
CUX2O14529 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
CUX2O14529 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
CUX2O14529 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC38.69■■■■□ 3.78
CUX2O14529 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
CUX2O14529 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
CUX2O14529 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC38.68■■■■□ 3.78
CUX2O14529 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
CUX2O14529 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
CUX2O14529 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC38.68■■■■□ 3.78
CUX2O14529 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC38.68■■■■□ 3.78
CUX2O14529 AC010501.1-201ENST00000606270 1962 ntBASIC38.68■■■■□ 3.78
CUX2O14529 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
CUX2O14529 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC38.67■■■■□ 3.78
CUX2O14529 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC38.67■■■■□ 3.78
CUX2O14529 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC38.67■■■■□ 3.78
CUX2O14529 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC38.67■■■■□ 3.78
CUX2O14529 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC38.67■■■■□ 3.78
CUX2O14529 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC38.67■■■■□ 3.78
CUX2O14529 BAALC-201ENST00000297574 801 ntTSL 3 BASIC38.66■■■■□ 3.78
CUX2O14529 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC38.66■■■■□ 3.78
CUX2O14529 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
CUX2O14529 DUX4L16-201ENST00000555130 1264 ntBASIC38.66■■■■□ 3.78
CUX2O14529 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC38.66■■■■□ 3.78
CUX2O14529 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC38.66■■■■□ 3.78
CUX2O14529 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC38.66■■■■□ 3.78
CUX2O14529 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
CUX2O14529 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
CUX2O14529 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC38.66■■■■□ 3.78
CUX2O14529 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
CUX2O14529 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
CUX2O14529 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC38.65■■■■□ 3.78
CUX2O14529 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
CUX2O14529 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
CUX2O14529 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC38.65■■■■□ 3.78
CUX2O14529 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
CUX2O14529 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
CUX2O14529 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC38.64■■■■□ 3.78
CUX2O14529 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC38.64■■■■□ 3.78
CUX2O14529 SHF-206ENST00000560471 2499 ntTSL 5 BASIC38.64■■■■□ 3.78
CUX2O14529 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC38.64■■■■□ 3.78
CUX2O14529 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC38.64■■■■□ 3.78
CUX2O14529 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC38.63■■■■□ 3.78
CUX2O14529 IRX5-204ENST00000560154 879 ntTSL 5 BASIC38.63■■■■□ 3.77
CUX2O14529 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC38.63■■■■□ 3.77
CUX2O14529 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
CUX2O14529 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC38.63■■■■□ 3.77
CUX2O14529 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
CUX2O14529 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC38.63■■■■□ 3.77
CUX2O14529 AC141586.4-201ENST00000624558 1573 ntBASIC38.63■■■■□ 3.77
CUX2O14529 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
CUX2O14529 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC38.62■■■■□ 3.77
CUX2O14529 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC38.62■■■■□ 3.77
CUX2O14529 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC38.62■■■■□ 3.77
CUX2O14529 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC38.62■■■■□ 3.77
CUX2O14529 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC38.62■■■■□ 3.77
CUX2O14529 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC38.61■■■■□ 3.77
CUX2O14529 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
CUX2O14529 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC38.61■■■■□ 3.77
CUX2O14529 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
CUX2O14529 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
CUX2O14529 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC38.61■■■■□ 3.77
CUX2O14529 AC133637.1-201ENST00000624115 1537 ntBASIC38.61■■■■□ 3.77
CUX2O14529 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC38.61■■■■□ 3.77
CUX2O14529 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
CUX2O14529 AC007322.1-201ENST00000426983 750 ntBASIC38.6■■■■□ 3.77
CUX2O14529 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC38.6■■■■□ 3.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms