Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRABD2BA6NFA1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRABD2BA6NFA1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRABD2BA6NFA1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 AC026185.1-201ENST00000445748 174 ntBASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 AC137761.2-201ENST00000561729 223 ntBASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 AC145350.3-201ENST00000569033 163 ntBASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.4■■□□□ 1.02
TRABD2BA6NFA1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRABD2BA6NFA1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRABD2BA6NFA1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.39■■□□□ 1.02
TRABD2BA6NFA1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRABD2BA6NFA1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.39■■□□□ 1.01
TRABD2BA6NFA1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
TRABD2BA6NFA1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TRABD2BA6NFA1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TRABD2BA6NFA1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.39■■□□□ 1.01
TRABD2BA6NFA1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.39■■□□□ 1.01
TRABD2BA6NFA1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRABD2BA6NFA1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TRABD2BA6NFA1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRABD2BA6NFA1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.38■■□□□ 1.01
TRABD2BA6NFA1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.38■■□□□ 1.01
TRABD2BA6NFA1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
TRABD2BA6NFA1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRABD2BA6NFA1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.38■■□□□ 1.01
TRABD2BA6NFA1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRABD2BA6NFA1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRABD2BA6NFA1 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.38■■□□□ 1.01
TRABD2BA6NFA1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.38■■□□□ 1.01
TRABD2BA6NFA1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRABD2BA6NFA1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRABD2BA6NFA1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRABD2BA6NFA1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TRABD2BA6NFA1 AL355802.2-201ENST00000402069 882 ntBASIC21.37■■□□□ 1.01
TRABD2BA6NFA1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRABD2BA6NFA1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.37■■□□□ 1.01
TRABD2BA6NFA1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRABD2BA6NFA1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 AC133637.1-201ENST00000624115 1537 ntBASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRABD2BA6NFA1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 AL109923.1-201ENST00000618799 583 ntBASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TRABD2BA6NFA1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRABD2BA6NFA1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRABD2BA6NFA1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRABD2BA6NFA1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.34■■□□□ 1.01
TRABD2BA6NFA1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.34■■□□□ 1.01
TRABD2BA6NFA1 AC010525.1-201ENST00000585559 441 ntBASIC21.34■■□□□ 1.01
TRABD2BA6NFA1 KRT18P61-201ENST00000585825 1298 ntBASIC21.34■■□□□ 1.01
TRABD2BA6NFA1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.34■■□□□ 1.01
TRABD2BA6NFA1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRABD2BA6NFA1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRABD2BA6NFA1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.34■■□□□ 1.01
TRABD2BA6NFA1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.34■■□□□ 1.01
TRABD2BA6NFA1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.33■■□□□ 1.01
TRABD2BA6NFA1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRABD2BA6NFA1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.33■■□□□ 1.01
TRABD2BA6NFA1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRABD2BA6NFA1 AC006970.2-201ENST00000450065 779 ntBASIC21.33■■□□□ 1.01
TRABD2BA6NFA1 AP005435.1-201ENST00000529293 1178 ntBASIC21.33■■□□□ 1.01
TRABD2BA6NFA1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.33■■□□□ 1.01
TRABD2BA6NFA1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRABD2BA6NFA1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRABD2BA6NFA1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
TRABD2BA6NFA1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TRABD2BA6NFA1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms