Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D3BA6NDS4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D3BA6NDS4 LINC00543-201ENST00000567234 1845 ntBASIC22.68■■□□□ 1.22
TBC1D3BA6NDS4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.68■■□□□ 1.22
TBC1D3BA6NDS4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
TBC1D3BA6NDS4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 AC027612.3-201ENST00000413684 1047 ntBASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 AC012414.1-201ENST00000556676 535 ntBASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 AL031602.1-201ENST00000633169 911 ntBASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.67■■□□□ 1.22
TBC1D3BA6NDS4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.66■■□□□ 1.22
TBC1D3BA6NDS4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3BA6NDS4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3BA6NDS4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3BA6NDS4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TBC1D3BA6NDS4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.65■■□□□ 1.22
TBC1D3BA6NDS4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3BA6NDS4 AC123595.1-201ENST00000440769 1046 ntBASIC22.65■■□□□ 1.22
TBC1D3BA6NDS4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3BA6NDS4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.65■■□□□ 1.22
TBC1D3BA6NDS4 AP005435.1-201ENST00000529293 1178 ntBASIC22.65■■□□□ 1.22
TBC1D3BA6NDS4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3BA6NDS4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TBC1D3BA6NDS4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TBC1D3BA6NDS4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
TBC1D3BA6NDS4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TBC1D3BA6NDS4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TBC1D3BA6NDS4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.64■■□□□ 1.21
TBC1D3BA6NDS4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.64■■□□□ 1.21
TBC1D3BA6NDS4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TBC1D3BA6NDS4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TBC1D3BA6NDS4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TBC1D3BA6NDS4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TBC1D3BA6NDS4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TBC1D3BA6NDS4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.64■■□□□ 1.21
TBC1D3BA6NDS4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TBC1D3BA6NDS4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.63■■□□□ 1.21
TBC1D3BA6NDS4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 DUX4L2-201ENST00000561772 1275 ntBASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 DUX4L6-201ENST00000626483 1275 ntBASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 DUX4L1-201ENST00000627662 1275 ntBASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 DUX4L8-201ENST00000629013 1275 ntBASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 DUX4L3-201ENST00000630187 1275 ntBASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 DUX4L7-201ENST00000630678 1275 ntBASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 DUX4L5-201ENST00000630834 1275 ntBASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 AC004812.2-201ENST00000611079 2094 ntBASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TBC1D3BA6NDS4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TBC1D3BA6NDS4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TBC1D3BA6NDS4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TBC1D3BA6NDS4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms