Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC33.19■■■□□ 2.9
HFM1A2PYH4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
HFM1A2PYH4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
HFM1A2PYH4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC33.19■■■□□ 2.9
HFM1A2PYH4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC33.19■■■□□ 2.9
HFM1A2PYH4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
HFM1A2PYH4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
HFM1A2PYH4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC33.19■■■□□ 2.9
HFM1A2PYH4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
HFM1A2PYH4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC33.19■■■□□ 2.9
HFM1A2PYH4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC33.19■■■□□ 2.9
HFM1A2PYH4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
HFM1A2PYH4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
HFM1A2PYH4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC33.18■■■□□ 2.9
HFM1A2PYH4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
HFM1A2PYH4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC33.18■■■□□ 2.9
HFM1A2PYH4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC33.18■■■□□ 2.9
HFM1A2PYH4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
HFM1A2PYH4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
HFM1A2PYH4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
HFM1A2PYH4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC33.18■■■□□ 2.9
HFM1A2PYH4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
HFM1A2PYH4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC33.18■■■□□ 2.9
HFM1A2PYH4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC33.17■■■□□ 2.9
HFM1A2PYH4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC33.17■■■□□ 2.9
HFM1A2PYH4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
HFM1A2PYH4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
HFM1A2PYH4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC33.16■■■□□ 2.9
HFM1A2PYH4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
HFM1A2PYH4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
HFM1A2PYH4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC33.16■■■□□ 2.9
HFM1A2PYH4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
HFM1A2PYH4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
HFM1A2PYH4 RARRES2P6-201ENST00000567333 442 ntBASIC33.16■■■□□ 2.9
HFM1A2PYH4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC33.15■■■□□ 2.9
HFM1A2PYH4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
HFM1A2PYH4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
HFM1A2PYH4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
HFM1A2PYH4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC33.15■■■□□ 2.9
HFM1A2PYH4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC33.15■■■□□ 2.9
HFM1A2PYH4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
HFM1A2PYH4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
HFM1A2PYH4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC33.14■■■□□ 2.9
HFM1A2PYH4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC33.14■■■□□ 2.9
HFM1A2PYH4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
HFM1A2PYH4 IGHV3-19-201ENST00000521488 291 ntBASIC33.14■■■□□ 2.9
HFM1A2PYH4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC33.14■■■□□ 2.9
HFM1A2PYH4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
HFM1A2PYH4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
HFM1A2PYH4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC33.14■■■□□ 2.9
HFM1A2PYH4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC33.14■■■□□ 2.9
HFM1A2PYH4 AC004687.1-201ENST00000579003 1625 ntBASIC33.14■■■□□ 2.89
HFM1A2PYH4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
HFM1A2PYH4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
HFM1A2PYH4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC33.13■■■□□ 2.89
HFM1A2PYH4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
HFM1A2PYH4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC33.13■■■□□ 2.89
HFM1A2PYH4 DUSP8P3-201ENST00000399571 1760 ntBASIC33.13■■■□□ 2.89
HFM1A2PYH4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
HFM1A2PYH4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC33.13■■■□□ 2.89
HFM1A2PYH4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC33.13■■■□□ 2.89
HFM1A2PYH4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
HFM1A2PYH4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
HFM1A2PYH4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
HFM1A2PYH4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
HFM1A2PYH4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
HFM1A2PYH4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC33.12■■■□□ 2.89
HFM1A2PYH4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
HFM1A2PYH4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC33.12■■■□□ 2.89
HFM1A2PYH4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
HFM1A2PYH4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
HFM1A2PYH4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC33.12■■■□□ 2.89
HFM1A2PYH4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
HFM1A2PYH4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC33.11■■■□□ 2.89
HFM1A2PYH4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC33.11■■■□□ 2.89
HFM1A2PYH4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC33.11■■■□□ 2.89
HFM1A2PYH4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
HFM1A2PYH4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC33.11■■■□□ 2.89
HFM1A2PYH4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
HFM1A2PYH4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
HFM1A2PYH4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
HFM1A2PYH4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC33.11■■■□□ 2.89
HFM1A2PYH4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC33.1■■■□□ 2.89
HFM1A2PYH4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC33.1■■■□□ 2.89
HFM1A2PYH4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC33.1■■■□□ 2.89
HFM1A2PYH4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC33.1■■■□□ 2.89
HFM1A2PYH4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC33.1■■■□□ 2.89
HFM1A2PYH4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
HFM1A2PYH4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC33.1■■■□□ 2.89
HFM1A2PYH4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
HFM1A2PYH4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
HFM1A2PYH4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
HFM1A2PYH4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
HFM1A2PYH4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
HFM1A2PYH4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC33.09■■■□□ 2.89
HFM1A2PYH4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
HFM1A2PYH4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
HFM1A2PYH4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC33.09■■■□□ 2.89
HFM1A2PYH4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC33.09■■■□□ 2.89
HFM1A2PYH4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC33.08■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms