Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
A0A1W2PRF3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.2■□□□□ 0.5
A0A1W2PRF3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.2■□□□□ 0.5
A0A1W2PRF3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
A0A1W2PRF3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.2■□□□□ 0.5
A0A1W2PRF3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
A0A1W2PRF3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
A0A1W2PRF3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
A0A1W2PRF3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
A0A1W2PRF3 AC144652.1-201ENST00000609974 1624 ntBASIC18.2■□□□□ 0.5
A0A1W2PRF3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
A0A1W2PRF3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
A0A1W2PRF3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
A0A1W2PRF3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
A0A1W2PRF3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
A0A1W2PRF3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
A0A1W2PRF3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.19■□□□□ 0.5
A0A1W2PRF3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
A0A1W2PRF3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
A0A1W2PRF3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.18■□□□□ 0.5
A0A1W2PRF3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
A0A1W2PRF3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
A0A1W2PRF3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
A0A1W2PRF3 AF213884.3-201ENST00000563833 479 ntBASIC18.18■□□□□ 0.5
A0A1W2PRF3 AC008764.7-201ENST00000593779 1081 ntBASIC18.18■□□□□ 0.5
A0A1W2PRF3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.18■□□□□ 0.5
A0A1W2PRF3 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.18■□□□□ 0.5
A0A1W2PRF3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.18■□□□□ 0.5
A0A1W2PRF3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
A0A1W2PRF3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.18■□□□□ 0.5
A0A1W2PRF3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
A0A1W2PRF3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.18■□□□□ 0.5
A0A1W2PRF3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.17■□□□□ 0.5
A0A1W2PRF3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.17■□□□□ 0.5
A0A1W2PRF3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.17■□□□□ 0.5
A0A1W2PRF3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.17■□□□□ 0.5
A0A1W2PRF3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.17■□□□□ 0.5
A0A1W2PRF3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.17■□□□□ 0.5
A0A1W2PRF3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.17■□□□□ 0.5
A0A1W2PRF3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
A0A1W2PRF3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.17■□□□□ 0.5
A0A1W2PRF3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.17■□□□□ 0.5
A0A1W2PRF3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
A0A1W2PRF3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
A0A1W2PRF3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.16■□□□□ 0.5
A0A1W2PRF3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.16■□□□□ 0.5
A0A1W2PRF3 LINC01529-204ENST00000636474 1715 ntBASIC18.16■□□□□ 0.5
A0A1W2PRF3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
A0A1W2PRF3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.16■□□□□ 0.5
A0A1W2PRF3 AL031432.3-201ENST00000607698 485 ntBASIC18.16■□□□□ 0.5
A0A1W2PRF3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.16■□□□□ 0.5
A0A1W2PRF3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.16■□□□□ 0.5
A0A1W2PRF3 AL355001.2-201ENST00000620617 1191 ntBASIC18.16■□□□□ 0.5
A0A1W2PRF3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
A0A1W2PRF3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
A0A1W2PRF3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
A0A1W2PRF3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
A0A1W2PRF3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
A0A1W2PRF3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
A0A1W2PRF3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
A0A1W2PRF3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.16■□□□□ 0.5
A0A1W2PRF3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
A0A1W2PRF3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.15■□□□□ 0.5
A0A1W2PRF3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
A0A1W2PRF3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.15■□□□□ 0.5
A0A1W2PRF3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
A0A1W2PRF3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.15■□□□□ 0.5
A0A1W2PRF3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
A0A1W2PRF3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
A0A1W2PRF3 EDA-201ENST00000338901 1233 ntBASIC18.15■□□□□ 0.5
A0A1W2PRF3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.15■□□□□ 0.5
A0A1W2PRF3 AC133561.4-201ENST00000566112 224 ntBASIC18.15■□□□□ 0.5
A0A1W2PRF3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.15■□□□□ 0.5
A0A1W2PRF3 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.15■□□□□ 0.5
A0A1W2PRF3 AC011298.3-201ENST00000615796 283 ntBASIC18.15■□□□□ 0.5
A0A1W2PRF3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
A0A1W2PRF3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.15■□□□□ 0.5
A0A1W2PRF3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
A0A1W2PRF3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
A0A1W2PRF3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
A0A1W2PRF3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.14■□□□□ 0.5
A0A1W2PRF3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
A0A1W2PRF3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
A0A1W2PRF3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms