Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRBV5-4A0A0C4DH59 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.01■■□□□ 1.11
TRBV5-4A0A0C4DH59 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.01■■□□□ 1.11
TRBV5-4A0A0C4DH59 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.01■■□□□ 1.11
TRBV5-4A0A0C4DH59 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
TRBV5-4A0A0C4DH59 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRBV5-4A0A0C4DH59 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRBV5-4A0A0C4DH59 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TRBV5-4A0A0C4DH59 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
TRBV5-4A0A0C4DH59 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22■■□□□ 1.11
TRBV5-4A0A0C4DH59 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRBV5-4A0A0C4DH59 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22■■□□□ 1.11
TRBV5-4A0A0C4DH59 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22■■□□□ 1.11
TRBV5-4A0A0C4DH59 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22■■□□□ 1.11
TRBV5-4A0A0C4DH59 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRBV5-4A0A0C4DH59 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
TRBV5-4A0A0C4DH59 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRBV5-4A0A0C4DH59 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
TRBV5-4A0A0C4DH59 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.99■■□□□ 1.11
TRBV5-4A0A0C4DH59 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
TRBV5-4A0A0C4DH59 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRBV5-4A0A0C4DH59 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.99■■□□□ 1.11
TRBV5-4A0A0C4DH59 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRBV5-4A0A0C4DH59 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
TRBV5-4A0A0C4DH59 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRBV5-4A0A0C4DH59 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TRBV5-4A0A0C4DH59 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
TRBV5-4A0A0C4DH59 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRBV5-4A0A0C4DH59 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.99■■□□□ 1.11
TRBV5-4A0A0C4DH59 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRBV5-4A0A0C4DH59 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 MIR3181-201ENST00000578512 73 ntBASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 pRNA.6-201ENST00000610482 90 ntBASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 pRNA.5-201ENST00000612139 90 ntBASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 pRNA.11-201ENST00000618423 90 ntBASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 pRNA.13-201ENST00000619112 90 ntBASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.98■■□□□ 1.11
TRBV5-4A0A0C4DH59 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
TRBV5-4A0A0C4DH59 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRBV5-4A0A0C4DH59 DUX4L19-201ENST00000557448 1267 ntBASIC21.97■■□□□ 1.11
TRBV5-4A0A0C4DH59 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRBV5-4A0A0C4DH59 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.97■■□□□ 1.11
TRBV5-4A0A0C4DH59 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
TRBV5-4A0A0C4DH59 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.96■■□□□ 1.11
TRBV5-4A0A0C4DH59 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRBV5-4A0A0C4DH59 AL138724.1-201ENST00000606771 1088 ntBASIC21.96■■□□□ 1.11
TRBV5-4A0A0C4DH59 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
TRBV5-4A0A0C4DH59 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRBV5-4A0A0C4DH59 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRBV5-4A0A0C4DH59 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRBV5-4A0A0C4DH59 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 SERBP1P1-201ENST00000396021 1160 ntBASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 AC008406.3-201ENST00000620001 1374 ntBASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TRBV5-4A0A0C4DH59 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 AC133637.1-201ENST00000624115 1537 ntBASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.94■■□□□ 1.1
TRBV5-4A0A0C4DH59 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRBV5-4A0A0C4DH59 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRBV5-4A0A0C4DH59 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRBV5-4A0A0C4DH59 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRBV5-4A0A0C4DH59 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRBV5-4A0A0C4DH59 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.93■■□□□ 1.1
TRBV5-4A0A0C4DH59 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.93■■□□□ 1.1
TRBV5-4A0A0C4DH59 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.93■■□□□ 1.1
TRBV5-4A0A0C4DH59 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRBV5-4A0A0C4DH59 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms