Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV34A0A0B4J273 AL022069.1-201ENST00000568025 1636 ntBASIC17.1■□□□□ 0.33
TRAV34A0A0B4J273 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV34A0A0B4J273 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV34A0A0B4J273 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV34A0A0B4J273 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV34A0A0B4J273 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV34A0A0B4J273 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV34A0A0B4J273 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV34A0A0B4J273 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV34A0A0B4J273 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV34A0A0B4J273 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV34A0A0B4J273 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV34A0A0B4J273 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV34A0A0B4J273 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV34A0A0B4J273 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV34A0A0B4J273 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV34A0A0B4J273 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV34A0A0B4J273 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV34A0A0B4J273 ESRRAP2-201ENST00000418437 1549 ntBASIC17.09■□□□□ 0.33
TRAV34A0A0B4J273 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV34A0A0B4J273 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV34A0A0B4J273 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV34A0A0B4J273 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAV34A0A0B4J273 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV34A0A0B4J273 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV34A0A0B4J273 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV34A0A0B4J273 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 AC138932.1-201ENST00000534164 6830 ntBASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV34A0A0B4J273 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV34A0A0B4J273 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV34A0A0B4J273 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV34A0A0B4J273 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV34A0A0B4J273 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV34A0A0B4J273 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV34A0A0B4J273 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV34A0A0B4J273 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TRAV34A0A0B4J273 ALDH1A3-203ENST00000557963 1670 ntBASIC17.05■□□□□ 0.32
TRAV34A0A0B4J273 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms