Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV12-1A0A0B4J245 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV12-1A0A0B4J245 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV12-1A0A0B4J245 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.58■□□□□ 0.09
TRAV12-1A0A0B4J245 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV12-1A0A0B4J245 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV12-1A0A0B4J245 AL022069.1-201ENST00000568025 1636 ntBASIC15.58■□□□□ 0.09
TRAV12-1A0A0B4J245 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 AC010542.4-201ENST00000563151 1910 ntBASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV12-1A0A0B4J245 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 AC090877.2-201ENST00000558441 1738 ntBASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 AC005229.4-201ENST00000610085 2198 ntBASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 ALDH1A3-203ENST00000557963 1670 ntBASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV12-1A0A0B4J245 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV12-1A0A0B4J245 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-1A0A0B4J245 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV12-1A0A0B4J245 HES6-205ENST00000409356 528 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV12-1A0A0B4J245 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV12-1A0A0B4J245 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV12-1A0A0B4J245 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-1A0A0B4J245 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TRAV12-1A0A0B4J245 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-1A0A0B4J245 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-1A0A0B4J245 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV12-1A0A0B4J245 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms