Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 PCDHA6-201ENST00000378126 3267 ntBASIC14.05□□□□□ -0.16
HDAC11Q96DB2 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 OR52M2P-201ENST00000414298 959 ntBASIC14.05□□□□□ -0.16
HDAC11Q96DB2 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 AC019193.1-201ENST00000506678 823 ntBASIC14.05□□□□□ -0.16
HDAC11Q96DB2 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 AP001184.1-201ENST00000637936 376 ntBASIC14.05□□□□□ -0.16
HDAC11Q96DB2 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC11Q96DB2 AC011481.3-201ENST00000623895 5594 ntBASIC14.04□□□□□ -0.16
HDAC11Q96DB2 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 CICP9-201ENST00000444451 1913 ntBASIC14.04□□□□□ -0.16
HDAC11Q96DB2 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AL512430.1-201ENST00000392575 860 ntBASIC14.04□□□□□ -0.16
HDAC11Q96DB2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 UPF3AP2-201ENST00000457924 1132 ntBASIC14.04□□□□□ -0.16
HDAC11Q96DB2 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AL132994.1-201ENST00000554098 400 ntBASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 MIR3907-201ENST00000579424 151 ntBASIC14.04□□□□□ -0.16
HDAC11Q96DB2 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AC103810.10-201ENST00000606504 343 ntBASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AL009176.1-201ENST00000607876 650 ntBASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AC084781.1-201ENST00000613737 656 ntBASIC14.04□□□□□ -0.16
HDAC11Q96DB2 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AC007336.3-201ENST00000623886 2160 ntBASIC14.04□□□□□ -0.16
HDAC11Q96DB2 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 Z82170.1-201ENST00000625081 3192 ntBASIC14.04□□□□□ -0.16
HDAC11Q96DB2 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC11Q96DB2 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC11Q96DB2 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC11Q96DB2 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HDAC11Q96DB2 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.03□□□□□ -0.16
HDAC11Q96DB2 AC115284.2-201ENST00000624646 2054 ntBASIC14.03□□□□□ -0.16
HDAC11Q96DB2 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.03□□□□□ -0.16
HDAC11Q96DB2 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC11Q96DB2 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HDAC11Q96DB2 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC11Q96DB2 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms