Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC12.01□□□□□ -0.49
AP3S1Q92572 AC005696.4-201ENST00000614400 3147 ntBASIC12.01□□□□□ -0.49
AP3S1Q92572 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC12.01□□□□□ -0.49
AP3S1Q92572 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
AP3S1Q92572 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S1Q92572 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.01□□□□□ -0.49
AP3S1Q92572 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
AP3S1Q92572 BAATP1-201ENST00000412284 1225 ntBASIC12.01□□□□□ -0.49
AP3S1Q92572 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 AC092580.1-201ENST00000433998 658 ntBASIC12.01□□□□□ -0.49
AP3S1Q92572 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.01□□□□□ -0.49
AP3S1Q92572 AP006288.1-201ENST00000446065 395 ntBASIC12.01□□□□□ -0.49
AP3S1Q92572 ELK1P1-201ENST00000485699 580 ntBASIC12.01□□□□□ -0.49
AP3S1Q92572 AC112482.1-201ENST00000492080 688 ntBASIC12.01□□□□□ -0.49
AP3S1Q92572 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.01□□□□□ -0.49
AP3S1Q92572 AC093214.1-201ENST00000511688 1107 ntBASIC12.01□□□□□ -0.49
AP3S1Q92572 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.01□□□□□ -0.49
AP3S1Q92572 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.01□□□□□ -0.49
AP3S1Q92572 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.01□□□□□ -0.49
AP3S1Q92572 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S1Q92572 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
AP3S1Q92572 PGAM1P5-201ENST00000548011 764 ntBASIC12.01□□□□□ -0.49
AP3S1Q92572 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.01□□□□□ -0.49
AP3S1Q92572 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.01□□□□□ -0.49
AP3S1Q92572 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 EGLN3-205ENST00000547327 2849 ntBASIC12.01□□□□□ -0.49
AP3S1Q92572 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S1Q92572 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
AP3S1Q92572 LINC01815-202ENST00000641468 1409 ntBASIC12.01□□□□□ -0.49
AP3S1Q92572 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
AP3S1Q92572 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S1Q92572 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.01□□□□□ -0.49
AP3S1Q92572 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.01□□□□□ -0.49
AP3S1Q92572 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC12.01□□□□□ -0.49
AP3S1Q92572 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC12□□□□□ -0.49
AP3S1Q92572 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC12□□□□□ -0.49
AP3S1Q92572 AFG3L2P1-201ENST00000521792 1763 ntBASIC12□□□□□ -0.49
AP3S1Q92572 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC12□□□□□ -0.49
AP3S1Q92572 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC12□□□□□ -0.49
AP3S1Q92572 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12□□□□□ -0.49
AP3S1Q92572 HLA-V-201ENST00000429037 534 ntBASIC12□□□□□ -0.49
AP3S1Q92572 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 BCRP1-201ENST00000444246 691 ntBASIC12□□□□□ -0.49
AP3S1Q92572 AC007279.1-201ENST00000448547 837 ntBASIC12□□□□□ -0.49
AP3S1Q92572 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12□□□□□ -0.49
AP3S1Q92572 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12□□□□□ -0.49
AP3S1Q92572 AC106794.1-201ENST00000506935 792 ntBASIC12□□□□□ -0.49
AP3S1Q92572 RNA5SP486-201ENST00000515961 83 ntBASIC12□□□□□ -0.49
AP3S1Q92572 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12□□□□□ -0.49
AP3S1Q92572 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
AP3S1Q92572 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12□□□□□ -0.49
AP3S1Q92572 AC009884.2-201ENST00000603110 324 ntBASIC12□□□□□ -0.49
AP3S1Q92572 ZACNP1-201ENST00000612259 710 ntBASIC12□□□□□ -0.49
AP3S1Q92572 AC145098.2-201ENST00000623593 3026 ntBASIC12□□□□□ -0.49
AP3S1Q92572 AHCYP4-201ENST00000419201 1315 ntBASIC12□□□□□ -0.49
AP3S1Q92572 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
AP3S1Q92572 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
AP3S1Q92572 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12□□□□□ -0.49
AP3S1Q92572 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC12□□□□□ -0.49
AP3S1Q92572 AC138761.6-201ENST00000583997 1423 ntBASIC12□□□□□ -0.49
AP3S1Q92572 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
AP3S1Q92572 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
AP3S1Q92572 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC12□□□□□ -0.49
AP3S1Q92572 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
AP3S1Q92572 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms