Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 GUCY2EP-203ENST00000531117 1918 ntBASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 ACTBP7-201ENST00000418351 1124 ntBASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 HNRNPA1P21-201ENST00000424115 961 ntBASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 PGK1P2-201ENST00000431702 1214 ntBASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 MIR5001-201ENST00000580185 100 ntBASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 KF455155.1-201ENST00000604493 303 ntBASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 PCDHA6-201ENST00000378126 3267 ntBASIC14.25□□□□□ -0.13
SHKBP1Q8TBC3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 AC018695.6-201ENST00000614011 534 ntBASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 AP001527.2-201ENST00000614441 631 ntBASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 AC010531.8-201ENST00000623341 685 ntBASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 AP002761.4-201ENST00000565433 3361 ntBASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHKBP1Q8TBC3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms