Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 PI4KAP2-201ENST00000360806 2080 ntBASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 IL9RP3-201ENST00000442856 1674 ntBASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 AL355102.3-201ENST00000554299 1678 ntBASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 KRT18P62-201ENST00000446618 1287 ntBASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 AC104784.1-201ENST00000473096 294 ntBASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 RN7SL555P-201ENST00000584742 339 ntBASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 MIR8071-1-201ENST00000616769 65 ntBASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 MIR8071-2-201ENST00000616772 65 ntBASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 AC008040.5-201ENST00000599781 1781 ntBASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
LYSMD3Q7Z3D4 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 OR7E115P-201ENST00000382617 1024 ntBASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 AC092638.2-201ENST00000441105 947 ntBASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 RN7SL8P-201ENST00000461771 266 ntBASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 AC137695.1-201ENST00000604126 489 ntBASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD3Q7Z3D4 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms