Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 SLC25A6P1-201ENST00000412123 775 ntBASIC16.67■□□□□ 0.26
RC3H1Q5TC82 AC007312.1-201ENST00000427493 258 ntBASIC16.67■□□□□ 0.26
RC3H1Q5TC82 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 AC139143.1-201ENST00000441772 1207 ntBASIC16.67■□□□□ 0.26
RC3H1Q5TC82 CDCA4P3-201ENST00000442572 689 ntBASIC16.67■□□□□ 0.26
RC3H1Q5TC82 HNRNPA1P9-201ENST00000450624 950 ntBASIC16.67■□□□□ 0.26
RC3H1Q5TC82 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 RN7SKP195-201ENST00000516587 303 ntBASIC16.67■□□□□ 0.26
RC3H1Q5TC82 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 FP325317.1-201ENST00000539936 1042 ntBASIC16.67■□□□□ 0.26
RC3H1Q5TC82 AC103706.1-201ENST00000561761 679 ntBASIC16.67■□□□□ 0.26
RC3H1Q5TC82 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 POM121L14P-201ENST00000406100 1558 ntBASIC16.67■□□□□ 0.26
RC3H1Q5TC82 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RC3H1Q5TC82 AC009093.9-201ENST00000566038 1611 ntBASIC16.67■□□□□ 0.26
RC3H1Q5TC82 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 AKIRIN1P2-201ENST00000440655 570 ntBASIC16.66■□□□□ 0.26
RC3H1Q5TC82 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 AC105424.1-201ENST00000514583 209 ntBASIC16.66■□□□□ 0.26
RC3H1Q5TC82 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 AC005549.1-201ENST00000579438 1629 ntBASIC16.66■□□□□ 0.26
RC3H1Q5TC82 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RC3H1Q5TC82 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 TFAM-201ENST00000373895 973 ntTSL 2 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms