Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
SLC1A1P43005 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SLC1A1P43005 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC1A1P43005 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 AC091181.1-201ENST00000623762 2098 ntBASIC14.24□□□□□ -0.13
SLC1A1P43005 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SLC1A1P43005 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 AOC4P-203ENST00000566825 2289 ntBASIC14.24□□□□□ -0.13
SLC1A1P43005 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SLC1A1P43005 AC118758.2-201ENST00000614242 2813 ntBASIC14.23□□□□□ -0.13
SLC1A1P43005 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SLC1A1P43005 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A1P43005 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A1P43005 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SLC1A1P43005 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A1P43005 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SLC1A1P43005 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A1P43005 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC1A1P43005 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.23□□□□□ -0.13
SLC1A1P43005 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A1P43005 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.23□□□□□ -0.13
SLC1A1P43005 MIR4538-201ENST00000581377 78 ntBASIC14.23□□□□□ -0.13
SLC1A1P43005 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC1A1P43005 AC092171.5-201ENST00000608012 942 ntBASIC14.23□□□□□ -0.13
SLC1A1P43005 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.23□□□□□ -0.13
SLC1A1P43005 AL353770.1-201ENST00000614915 403 ntBASIC14.23□□□□□ -0.13
SLC1A1P43005 AC011491.1-203ENST00000637688 543 ntBASIC14.23□□□□□ -0.13
SLC1A1P43005 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC14.23□□□□□ -0.13
SLC1A1P43005 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 AL731571.1-201ENST00000617058 5428 ntBASIC14.23□□□□□ -0.13
SLC1A1P43005 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A1P43005 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A1P43005 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC1A1P43005 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC1A1P43005 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC1A1P43005 AL139385.1-201ENST00000611744 3272 ntBASIC14.23□□□□□ -0.13
SLC1A1P43005 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SLC1A1P43005 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 PTN-202ENST00000393083 1599 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC1A1P43005 LINC02228-202ENST00000641261 2489 ntBASIC14.22□□□□□ -0.13
SLC1A1P43005 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC1A1P43005 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC1A1P43005 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SLC1A1P43005 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
SLC1A1P43005 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SLC1A1P43005 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A1P43005 HNRNPA1P33-201ENST00000421426 561 ntBASIC14.22□□□□□ -0.13
SLC1A1P43005 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC1A1P43005 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC1A1P43005 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC1A1P43005 STK24P1-201ENST00000455035 1291 ntBASIC14.22□□□□□ -0.13
SLC1A1P43005 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC1A1P43005 RTN3P1-201ENST00000536295 711 ntBASIC14.22□□□□□ -0.13
SLC1A1P43005 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC1A1P43005 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC1A1P43005 KRT8P2-201ENST00000556193 944 ntBASIC14.22□□□□□ -0.13
SLC1A1P43005 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.22□□□□□ -0.13
SLC1A1P43005 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC1A1P43005 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms