Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.2□□□□□ -0.14
MTHFRP42898 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.2□□□□□ -0.14
MTHFRP42898 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
MTHFRP42898 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 SAP18P2-201ENST00000434334 459 ntBASIC14.2□□□□□ -0.14
MTHFRP42898 AL356000.1-201ENST00000441073 1238 ntBASIC14.2□□□□□ -0.14
MTHFRP42898 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.2□□□□□ -0.14
MTHFRP42898 SNORA47-201ENST00000458862 138 ntBASIC14.2□□□□□ -0.14
MTHFRP42898 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC14.2□□□□□ -0.14
MTHFRP42898 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC14.2□□□□□ -0.14
MTHFRP42898 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.2□□□□□ -0.14
MTHFRP42898 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MTHFRP42898 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MTHFRP42898 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MTHFRP42898 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
MTHFRP42898 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 AC245140.2-201ENST00000624054 1939 ntBASIC14.19□□□□□ -0.14
MTHFRP42898 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
MTHFRP42898 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.19□□□□□ -0.14
MTHFRP42898 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC14.19□□□□□ -0.14
MTHFRP42898 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.19□□□□□ -0.14
MTHFRP42898 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
MTHFRP42898 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
MTHFRP42898 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.19□□□□□ -0.14
MTHFRP42898 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.19□□□□□ -0.14
MTHFRP42898 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
MTHFRP42898 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
MTHFRP42898 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MTHFRP42898 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MTHFRP42898 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
MTHFRP42898 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC14.19□□□□□ -0.14
MTHFRP42898 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC14.19□□□□□ -0.14
MTHFRP42898 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC14.19□□□□□ -0.14
MTHFRP42898 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
MTHFRP42898 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC14.19□□□□□ -0.14
MTHFRP42898 AC233724.9-201ENST00000511694 407 ntBASIC14.19□□□□□ -0.14
MTHFRP42898 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC14.19□□□□□ -0.14
MTHFRP42898 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC14.19□□□□□ -0.14
MTHFRP42898 MYL6-215ENST00000549566 685 ntTSL 2 BASIC14.19□□□□□ -0.14
MTHFRP42898 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC14.19□□□□□ -0.14
MTHFRP42898 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.19□□□□□ -0.14
MTHFRP42898 RN7SL162P-201ENST00000579233 292 ntBASIC14.19□□□□□ -0.14
MTHFRP42898 AC136475.7-201ENST00000602949 592 ntBASIC14.19□□□□□ -0.14
MTHFRP42898 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 AC106782.5-201ENST00000616011 337 ntBASIC14.19□□□□□ -0.14
MTHFRP42898 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
MTHFRP42898 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
MTHFRP42898 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 AC093462.1-201ENST00000621167 1683 ntBASIC14.19□□□□□ -0.14
MTHFRP42898 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.19□□□□□ -0.14
MTHFRP42898 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MTHFRP42898 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms