Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CD74P04233 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CD74P04233 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CD74P04233 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CD74P04233 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CD74P04233 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC11.46□□□□□ -0.58
CD74P04233 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CD74P04233 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.58
CD74P04233 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
CD74P04233 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC11.45□□□□□ -0.58
CD74P04233 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC11.45□□□□□ -0.58
CD74P04233 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
CD74P04233 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC11.45□□□□□ -0.58
CD74P04233 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC11.45□□□□□ -0.58
CD74P04233 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 MIR661-201ENST00000384842 89 ntBASIC11.45□□□□□ -0.58
CD74P04233 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.45□□□□□ -0.58
CD74P04233 AP006294.1-201ENST00000415407 339 ntBASIC11.45□□□□□ -0.58
CD74P04233 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.45□□□□□ -0.58
CD74P04233 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.45□□□□□ -0.58
CD74P04233 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.45□□□□□ -0.58
CD74P04233 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.45□□□□□ -0.58
CD74P04233 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 AC008805.1-201ENST00000590892 364 ntBASIC11.45□□□□□ -0.58
CD74P04233 HPN-206ENST00000597419 1212 ntTSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 AC092171.5-201ENST00000608012 942 ntBASIC11.45□□□□□ -0.58
CD74P04233 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.45□□□□□ -0.58
CD74P04233 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 GARS-210ENST00000627489 324 ntTSL 4 BASIC11.45□□□□□ -0.58
CD74P04233 RHOXF1P1-202ENST00000635473 501 ntBASIC11.45□□□□□ -0.58
CD74P04233 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 AL513497.1-201ENST00000624273 2083 ntBASIC11.45□□□□□ -0.58
CD74P04233 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.45□□□□□ -0.58
CD74P04233 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC11.45□□□□□ -0.58
CD74P04233 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.45□□□□□ -0.58
CD74P04233 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.45□□□□□ -0.58
CD74P04233 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC11.45□□□□□ -0.58
CD74P04233 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CD74P04233 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CD74P04233 CSPG4P11-201ENST00000560634 4910 ntBASIC11.45□□□□□ -0.58
CD74P04233 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.44□□□□□ -0.58
CD74P04233 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CD74P04233 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC11.44□□□□□ -0.58
CD74P04233 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
CD74P04233 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC11.44□□□□□ -0.58
CD74P04233 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CD74P04233 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.44□□□□□ -0.58
CD74P04233 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CD74P04233 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC11.44□□□□□ -0.58
CD74P04233 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CD74P04233 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms