Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 AC011742.3-201ENST00000439053 820 ntBASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 DNAJB3-202ENST00000449667 1266 ntBASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 RN7SL455P-201ENST00000580629 282 ntBASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 CHCHD2P3-201ENST00000603038 451 ntBASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMGB1P1B2RPK0 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC13.83□□□□□ -0.19
HMGB1P1B2RPK0 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC13.83□□□□□ -0.19
HMGB1P1B2RPK0 SHROOM2P1-201ENST00000434773 2384 ntBASIC13.83□□□□□ -0.19
HMGB1P1B2RPK0 NTM-206ENST00000427481 2583 ntTSL 5 BASIC13.83□□□□□ -0.19
HMGB1P1B2RPK0 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
HMGB1P1B2RPK0 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HMGB1P1B2RPK0 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 AC106794.1-201ENST00000506935 792 ntBASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 MIR5189-201ENST00000577370 114 ntBASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 PPY2P-201ENST00000582808 702 ntBASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 AL583810.2-201ENST00000556430 3254 ntBASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 AC139491.6-202ENST00000637171 2077 ntBASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMGB1P1B2RPK0 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 AC004554.1-201ENST00000422830 1468 ntBASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 AC012441.2-201ENST00000444843 739 ntBASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 KLF2P1-201ENST00000447438 1042 ntBASIC13.82□□□□□ -0.2
HMGB1P1B2RPK0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms