Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC006987.1-201ENST00000413610 527 ntBASIC10.41□□□□□ -0.74
VGLL1Q99990 OR8T1P-201ENST00000421347 918 ntBASIC10.41□□□□□ -0.74
VGLL1Q99990 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC10.41□□□□□ -0.74
VGLL1Q99990 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 AC104073.2-201ENST00000453737 312 ntBASIC10.41□□□□□ -0.74
VGLL1Q99990 GPR53P-205ENST00000457298 1084 ntBASIC10.41□□□□□ -0.74
VGLL1Q99990 ATP6V0CP2-201ENST00000469409 207 ntBASIC10.41□□□□□ -0.74
VGLL1Q99990 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC10.41□□□□□ -0.74
VGLL1Q99990 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC10.41□□□□□ -0.74
VGLL1Q99990 CD74-212ENST00000524315 584 ntTSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC10.41□□□□□ -0.74
VGLL1Q99990 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC10.41□□□□□ -0.74
VGLL1Q99990 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC10.41□□□□□ -0.74
VGLL1Q99990 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC10.41□□□□□ -0.74
VGLL1Q99990 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 AL022334.2-201ENST00000610000 484 ntBASIC10.41□□□□□ -0.74
VGLL1Q99990 AC090164.2-201ENST00000611487 516 ntBASIC10.41□□□□□ -0.74
VGLL1Q99990 AL157813.1-201ENST00000612996 587 ntBASIC10.41□□□□□ -0.74
VGLL1Q99990 MIR6775-201ENST00000617557 69 ntBASIC10.41□□□□□ -0.74
VGLL1Q99990 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 AC068587.8-201ENST00000641239 219 ntBASIC10.41□□□□□ -0.74
VGLL1Q99990 AC004923.1-202ENST00000642106 209 ntBASIC10.41□□□□□ -0.74
VGLL1Q99990 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
VGLL1Q99990 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VGLL1Q99990 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC10.41□□□□□ -0.74
VGLL1Q99990 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC10.4□□□□□ -0.74
VGLL1Q99990 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC10.4□□□□□ -0.74
VGLL1Q99990 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
VGLL1Q99990 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
VGLL1Q99990 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 MICA-210ENST00000616296 2260 ntTSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC10.4□□□□□ -0.74
VGLL1Q99990 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
VGLL1Q99990 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 BAX-205ENST00000391871 687 ntTSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC10.4□□□□□ -0.74
VGLL1Q99990 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 GSAP-205ENST00000430584 600 ntTSL 5 BASIC10.4□□□□□ -0.74
VGLL1Q99990 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC10.4□□□□□ -0.74
VGLL1Q99990 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VGLL1Q99990 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms