Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LMO3Q8TAP4 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.46□□□□□ -0.1
LMO3Q8TAP4 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LMO3Q8TAP4 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC14.46□□□□□ -0.1
LMO3Q8TAP4 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
LMO3Q8TAP4 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LMO3Q8TAP4 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 AC069218.1-201ENST00000435269 762 ntBASIC14.45□□□□□ -0.1
LMO3Q8TAP4 RPE-208ENST00000436630 1128 ntTSL 2 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 AC092638.2-201ENST00000441105 947 ntBASIC14.45□□□□□ -0.1
LMO3Q8TAP4 RPL35P9-201ENST00000446059 350 ntBASIC14.45□□□□□ -0.1
LMO3Q8TAP4 RN7SL23P-201ENST00000484055 275 ntBASIC14.45□□□□□ -0.1
LMO3Q8TAP4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 METTL7AP1-201ENST00000547343 496 ntBASIC14.45□□□□□ -0.1
LMO3Q8TAP4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 AL118522.1-201ENST00000611368 560 ntBASIC14.45□□□□□ -0.1
LMO3Q8TAP4 DUX4L33-201ENST00000635217 958 ntBASIC14.45□□□□□ -0.1
LMO3Q8TAP4 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LMO3Q8TAP4 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 AC008806.1-201ENST00000624962 2443 ntBASIC14.44□□□□□ -0.1
LMO3Q8TAP4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 LINC00563-201ENST00000566370 1400 ntBASIC14.44□□□□□ -0.1
LMO3Q8TAP4 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 AC098935.1-201ENST00000446057 611 ntBASIC14.44□□□□□ -0.1
LMO3Q8TAP4 LYPLA2P1-203ENST00000447689 696 ntBASIC14.44□□□□□ -0.1
LMO3Q8TAP4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 KRT18P37-201ENST00000520711 1282 ntBASIC14.44□□□□□ -0.1
LMO3Q8TAP4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 AC018635.2-201ENST00000608625 364 ntBASIC14.44□□□□□ -0.1
LMO3Q8TAP4 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.44□□□□□ -0.1
LMO3Q8TAP4 AC126755.5-201ENST00000622756 267 ntBASIC14.44□□□□□ -0.1
LMO3Q8TAP4 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LMO3Q8TAP4 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC14.43□□□□□ -0.1
LMO3Q8TAP4 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms