Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC14.99□□□□□ -0.01
GPC3P51654 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.99□□□□□ -0.01
GPC3P51654 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.99□□□□□ -0.01
GPC3P51654 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GPC3P51654 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.98□□□□□ -0.01
GPC3P51654 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
GPC3P51654 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
GPC3P51654 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
GPC3P51654 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.98□□□□□ -0.01
GPC3P51654 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.98□□□□□ -0.01
GPC3P51654 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.98□□□□□ -0.01
GPC3P51654 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC14.98□□□□□ -0.01
GPC3P51654 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 AC006548.2-201ENST00000605217 529 ntBASIC14.98□□□□□ -0.01
GPC3P51654 AC113385.2-201ENST00000614465 762 ntBASIC14.98□□□□□ -0.01
GPC3P51654 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.98□□□□□ -0.01
GPC3P51654 AC137723.2-201ENST00000623540 398 ntBASIC14.98□□□□□ -0.01
GPC3P51654 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
GPC3P51654 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GPC3P51654 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
GPC3P51654 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.98□□□□□ -0.01
GPC3P51654 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.98□□□□□ -0.01
GPC3P51654 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
GPC3P51654 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GPC3P51654 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 AC138969.2-201ENST00000532739 9932 ntBASIC14.97□□□□□ -0.01
GPC3P51654 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC3P51654 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GPC3P51654 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC3P51654 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.97□□□□□ -0.01
GPC3P51654 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC3P51654 AC136604.1-202ENST00000425471 771 ntBASIC14.97□□□□□ -0.01
GPC3P51654 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC3P51654 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.97□□□□□ -0.01
GPC3P51654 RPL29P2-202ENST00000498671 657 ntBASIC14.97□□□□□ -0.01
GPC3P51654 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC14.97□□□□□ -0.01
GPC3P51654 PIGCP1-201ENST00000527583 895 ntBASIC14.97□□□□□ -0.01
GPC3P51654 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
GPC3P51654 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC14.97□□□□□ -0.01
GPC3P51654 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC14.97□□□□□ -0.01
GPC3P51654 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.97□□□□□ -0.01
GPC3P51654 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.97□□□□□ -0.01
GPC3P51654 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GPC3P51654 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.97□□□□□ -0.01
GPC3P51654 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms