Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SMARCA4P51532 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCA4P51532 AC009237.11-201ENST00000425635 265 ntBASIC23.17■■□□□ 1.3
SMARCA4P51532 AL354733.3-201ENST00000448389 390 ntTSL 3 BASIC23.17■■□□□ 1.3
SMARCA4P51532 AC018892.1-201ENST00000451098 265 ntBASIC23.17■■□□□ 1.3
SMARCA4P51532 LINC01324-202ENST00000497379 838 ntTSL 5 BASIC23.17■■□□□ 1.3
SMARCA4P51532 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC23.17■■□□□ 1.3
SMARCA4P51532 AP001107.8-201ENST00000530805 479 ntTSL 3 BASIC23.17■■□□□ 1.3
SMARCA4P51532 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC23.17■■□□□ 1.3
SMARCA4P51532 HP-215ENST00000569639 568 ntTSL 4 BASIC23.17■■□□□ 1.3
SMARCA4P51532 IKBKE-202ENST00000579827 678 ntTSL 2 BASIC23.17■■□□□ 1.3
SMARCA4P51532 IFI27-212ENST00000618863 505 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SMARCA4P51532 AL358215.3-201ENST00000640695 1186 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCA4P51532 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC23.17■■□□□ 1.3
SMARCA4P51532 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SMARCA4P51532 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCA4P51532 PCDHB19P-202ENST00000625133 2914 ntBASIC23.17■■□□□ 1.3
SMARCA4P51532 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCA4P51532 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC23.17■■□□□ 1.3
SMARCA4P51532 AIFM1P1-201ENST00000413342 1841 ntBASIC23.17■■□□□ 1.3
SMARCA4P51532 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCA4P51532 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCA4P51532 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCA4P51532 CASC4P1-201ENST00000456608 1312 ntBASIC23.16■■□□□ 1.3
SMARCA4P51532 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SMARCA4P51532 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCA4P51532 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SMARCA4P51532 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCA4P51532 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
SMARCA4P51532 AL121761.1-203ENST00000426012 677 ntTSL 3 BASIC23.16■■□□□ 1.3
SMARCA4P51532 ACTG1P10-201ENST00000428275 1082 ntBASIC23.16■■□□□ 1.3
SMARCA4P51532 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SMARCA4P51532 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC23.16■■□□□ 1.3
SMARCA4P51532 SNCA-208ENST00000505199 411 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCA4P51532 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC23.16■■□□□ 1.3
SMARCA4P51532 AP003717.2-201ENST00000534962 898 ntBASIC23.16■■□□□ 1.3
SMARCA4P51532 SIGLEC21P-201ENST00000598990 1010 ntBASIC23.16■■□□□ 1.3
SMARCA4P51532 RN7SL238P-201ENST00000613832 290 ntBASIC23.16■■□□□ 1.3
SMARCA4P51532 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC23.16■■□□□ 1.3
SMARCA4P51532 RN7SL106P-201ENST00000618104 290 ntBASIC23.16■■□□□ 1.3
SMARCA4P51532 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SMARCA4P51532 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC23.16■■□□□ 1.3
SMARCA4P51532 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCA4P51532 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCA4P51532 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCA4P51532 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
SMARCA4P51532 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCA4P51532 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SMARCA4P51532 AC009474.1-201ENST00000455096 1565 ntBASIC23.16■■□□□ 1.3
SMARCA4P51532 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SMARCA4P51532 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCA4P51532 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCA4P51532 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCA4P51532 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 AC026271.4-201ENST00000578214 1833 ntBASIC23.15■■□□□ 1.3
SMARCA4P51532 AL445933.2-201ENST00000440249 265 ntTSL 2 BASIC23.15■■□□□ 1.3
SMARCA4P51532 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC23.15■■□□□ 1.3
SMARCA4P51532 AC007923.4-201ENST00000578650 568 ntTSL 4 BASIC23.15■■□□□ 1.3
SMARCA4P51532 AC022146.2-201ENST00000605980 348 ntTSL 3 BASIC23.15■■□□□ 1.3
SMARCA4P51532 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC23.15■■□□□ 1.3
SMARCA4P51532 AC005840.4-201ENST00000541242 2494 ntBASIC23.15■■□□□ 1.3
SMARCA4P51532 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC23.15■■□□□ 1.3
SMARCA4P51532 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC23.15■■□□□ 1.3
SMARCA4P51532 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC23.15■■□□□ 1.3
SMARCA4P51532 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC23.15■■□□□ 1.3
SMARCA4P51532 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 AC004585.2-201ENST00000624090 1473 ntBASIC23.15■■□□□ 1.3
SMARCA4P51532 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 ANKRD26P3-201ENST00000454044 2748 ntBASIC23.15■■□□□ 1.3
SMARCA4P51532 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
SMARCA4P51532 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 AK4P5-201ENST00000404520 634 ntBASIC23.15■■□□□ 1.3
SMARCA4P51532 AL132709.1-202ENST00000448840 588 ntTSL 3 BASIC23.15■■□□□ 1.3
SMARCA4P51532 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC23.15■■□□□ 1.3
SMARCA4P51532 RN7SL255P-201ENST00000470639 296 ntBASIC23.15■■□□□ 1.3
SMARCA4P51532 AC003072.1-201ENST00000510957 612 ntBASIC23.15■■□□□ 1.3
SMARCA4P51532 IGHVII-65-1-201ENST00000519992 302 ntBASIC23.15■■□□□ 1.3
SMARCA4P51532 MIR4688-201ENST00000577966 83 ntBASIC23.15■■□□□ 1.3
SMARCA4P51532 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 AC109635.4-201ENST00000636653 1005 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 AL513478.3-201ENST00000641038 1095 ntBASIC23.15■■□□□ 1.3
SMARCA4P51532 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCA4P51532 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SMARCA4P51532 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SMARCA4P51532 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SMARCA4P51532 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC23.14■■□□□ 1.3
SMARCA4P51532 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SMARCA4P51532 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SMARCA4P51532 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC23.14■■□□□ 1.29
SMARCA4P51532 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCA4P51532 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms