Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 GSAP-205ENST00000430584 600 ntTSL 5 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 XBP1P1-201ENST00000436573 652 ntBASIC11.12□□□□□ -0.63
RAB40CQ96S21 CNN2P10-201ENST00000443067 918 ntBASIC11.12□□□□□ -0.63
RAB40CQ96S21 GAPDHP21-201ENST00000450301 1010 ntBASIC11.12□□□□□ -0.63
RAB40CQ96S21 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 HNRNPLP1-201ENST00000421896 1501 ntBASIC11.12□□□□□ -0.63
RAB40CQ96S21 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 RBM22P2-201ENST00000393978 1814 ntBASIC11.12□□□□□ -0.63
RAB40CQ96S21 NRADDP-202ENST00000641269 1585 ntBASIC11.11□□□□□ -0.63
RAB40CQ96S21 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 GUCY2EP-203ENST00000531117 1918 ntBASIC11.11□□□□□ -0.63
RAB40CQ96S21 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 AC100850.1-201ENST00000506768 649 ntBASIC11.11□□□□□ -0.63
RAB40CQ96S21 AC106794.1-201ENST00000506935 792 ntBASIC11.11□□□□□ -0.63
RAB40CQ96S21 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 KRT90P-201ENST00000549264 1064 ntBASIC11.11□□□□□ -0.63
RAB40CQ96S21 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms