Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.83□□□□□ -0.2
SHROOM3Q8TF72 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 RNVU1-8-201ENST00000364272 125 ntBASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 AC244197.1-201ENST00000456494 951 ntBASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 GHET1-201ENST00000627071 1906 ntBASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 KRT18P40-201ENST00000599859 1571 ntBASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 DDX39AP1-201ENST00000445147 1181 ntBASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 AP003398.1-201ENST00000531124 318 ntBASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 AC105137.3-201ENST00000617588 984 ntBASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 PCDHB18P-202ENST00000526308 3197 ntBASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHROOM3Q8TF72 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 MEX3B-202ENST00000558133 4333 ntBASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 AC041040.1-201ENST00000425197 460 ntBASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 FAM187B2P-201ENST00000577135 713 ntBASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 HSPA8P9-201ENST00000485881 1943 ntBASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.81□□□□□ -0.2
SHROOM3Q8TF72 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.8□□□□□ -0.2
SHROOM3Q8TF72 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHROOM3Q8TF72 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHROOM3Q8TF72 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHROOM3Q8TF72 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHROOM3Q8TF72 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.8□□□□□ -0.2
SHROOM3Q8TF72 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHROOM3Q8TF72 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SHROOM3Q8TF72 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC13.8□□□□□ -0.2
SHROOM3Q8TF72 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHROOM3Q8TF72 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHROOM3Q8TF72 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms