Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC20.8■□□□□ 0.92
VPS8Q8N3P4 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS8Q8N3P4 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VPS8Q8N3P4 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC20.8■□□□□ 0.92
VPS8Q8N3P4 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS8Q8N3P4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS8Q8N3P4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS8Q8N3P4 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS8Q8N3P4 PCDHA6-201ENST00000378126 3267 ntBASIC20.8■□□□□ 0.92
VPS8Q8N3P4 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS8Q8N3P4 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 DDX39AP1-201ENST00000445147 1181 ntBASIC20.79■□□□□ 0.92
VPS8Q8N3P4 KRT18P63-201ENST00000505463 979 ntBASIC20.79■□□□□ 0.92
VPS8Q8N3P4 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 HAL-202ENST00000538703 2637 ntTSL 2 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
VPS8Q8N3P4 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 DUX4L31-201ENST00000446466 1136 ntBASIC20.78■□□□□ 0.92
VPS8Q8N3P4 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 GOLGA2P10-201ENST00000550961 817 ntBASIC20.78■□□□□ 0.92
VPS8Q8N3P4 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 SLC6A6P1-201ENST00000413933 1850 ntBASIC20.78■□□□□ 0.92
VPS8Q8N3P4 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 SUPT20HL1-201ENST00000436466 2618 ntBASIC20.78■□□□□ 0.92
VPS8Q8N3P4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 AC067930.6-201ENST00000623257 4947 ntBASIC20.78■□□□□ 0.92
VPS8Q8N3P4 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 U73169.1-201ENST00000395152 367 ntBASIC20.78■□□□□ 0.92
VPS8Q8N3P4 MARCKSL1P2-201ENST00000401037 976 ntBASIC20.78■□□□□ 0.92
VPS8Q8N3P4 AL356000.1-201ENST00000441073 1238 ntBASIC20.78■□□□□ 0.92
VPS8Q8N3P4 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 AADAC-202ENST00000488869 719 ntTSL 2 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 HNRNPA1P55-201ENST00000505935 955 ntBASIC20.78■□□□□ 0.92
VPS8Q8N3P4 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 AC244097.1-201ENST00000621631 1216 ntBASIC20.78■□□□□ 0.92
VPS8Q8N3P4 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS8Q8N3P4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 AC011239.2-201ENST00000624820 1489 ntBASIC20.77■□□□□ 0.92
VPS8Q8N3P4 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
VPS8Q8N3P4 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms