Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AC139143.1-201ENST00000441772 1207 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 LINC01046-201ENST00000443719 405 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AL669970.2-201ENST00000446184 280 ntTSL 3 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 DNM1P17-201ENST00000512082 426 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 RN7SL624P-201ENST00000580297 278 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AC127526.5-201ENST00000637148 1110 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 CCRL2-202ENST00000399036 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 DDX12P-201ENST00000432996 2947 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 SNX18-202ENST00000343017 3140 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 MSNP1-201ENST00000511640 1732 ntBASIC8.69□□□□□ -1.02
VPS13DQ5THJ4 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AC006987.4-201ENST00000430032 279 ntBASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 SYP-AS1-201ENST00000433499 542 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 TGIF2P1-201ENST00000435390 685 ntBASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 TEPP-202ENST00000441824 998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AC142391.1-201ENST00000515823 1002 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AC006236.1-201ENST00000576249 797 ntBASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AC011472.2-201ENST00000586356 655 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 CLASP2-201ENST00000313350 1597 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 ENO4-203ENST00000409522 1840 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 CXorf40B-201ENST00000355203 1067 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AP005901.1-201ENST00000508721 1181 ntBASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 OR7E14P-201ENST00000526721 1000 ntBASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AC124947.1-201ENST00000552835 814 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 PSME2-213ENST00000560410 755 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 POPDC2-204ENST00000468801 1345 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 EEF1DP8-201ENST00000534760 536 ntBASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AC004585.2-201ENST00000624090 1473 ntBASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 CICP9-201ENST00000444451 1913 ntBASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS13DQ5THJ4 KCNE1-205ENST00000416357 796 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms