Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ASIC1P78348 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASIC1P78348 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASIC1P78348 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ASIC1P78348 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC15.26■□□□□ 0.03
ASIC1P78348 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASIC1P78348 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ASIC1P78348 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC15.26■□□□□ 0.03
ASIC1P78348 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC15.25■□□□□ 0.03
ASIC1P78348 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 AL805961.2-201ENST00000642139 4817 ntBASIC15.25■□□□□ 0.03
ASIC1P78348 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ASIC1P78348 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ASIC1P78348 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.25■□□□□ 0.03
ASIC1P78348 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.25■□□□□ 0.03
ASIC1P78348 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.25■□□□□ 0.03
ASIC1P78348 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.25■□□□□ 0.03
ASIC1P78348 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.25■□□□□ 0.03
ASIC1P78348 AC234782.1-201ENST00000451950 919 ntBASIC15.25■□□□□ 0.03
ASIC1P78348 RN7SL767P-201ENST00000493013 295 ntBASIC15.25■□□□□ 0.03
ASIC1P78348 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.25■□□□□ 0.03
ASIC1P78348 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ASIC1P78348 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.25■□□□□ 0.03
ASIC1P78348 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.25■□□□□ 0.03
ASIC1P78348 AC132812.1-201ENST00000583145 892 ntBASIC15.25■□□□□ 0.03
ASIC1P78348 AL359091.4-201ENST00000610052 409 ntBASIC15.25■□□□□ 0.03
ASIC1P78348 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC15.25■□□□□ 0.03
ASIC1P78348 HNRNPLP1-201ENST00000421896 1501 ntBASIC15.25■□□□□ 0.03
ASIC1P78348 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.25■□□□□ 0.03
ASIC1P78348 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ASIC1P78348 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC15.25■□□□□ 0.03
ASIC1P78348 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ASIC1P78348 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC15.25■□□□□ 0.03
ASIC1P78348 AL031719.1-201ENST00000623365 2587 ntBASIC15.25■□□□□ 0.03
ASIC1P78348 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ASIC1P78348 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC15.24■□□□□ 0.03
ASIC1P78348 PCDHB19P-202ENST00000625133 2914 ntBASIC15.24■□□□□ 0.03
ASIC1P78348 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ASIC1P78348 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.24■□□□□ 0.03
ASIC1P78348 OR52M2P-201ENST00000414298 959 ntBASIC15.24■□□□□ 0.03
ASIC1P78348 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC15.24■□□□□ 0.03
ASIC1P78348 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.24■□□□□ 0.03
ASIC1P78348 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.24■□□□□ 0.03
ASIC1P78348 ORAOV1P1-201ENST00000503108 395 ntBASIC15.24■□□□□ 0.03
ASIC1P78348 PRSS3P1-201ENST00000503996 742 ntBASIC15.24■□□□□ 0.03
ASIC1P78348 MRPL22P1-201ENST00000505398 616 ntBASIC15.24■□□□□ 0.03
ASIC1P78348 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.24■□□□□ 0.03
ASIC1P78348 RN7SKP155-201ENST00000516031 288 ntBASIC15.24■□□□□ 0.03
ASIC1P78348 SNORD3B-1-201ENST00000577988 758 ntBASIC15.24■□□□□ 0.03
ASIC1P78348 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.24■□□□□ 0.03
ASIC1P78348 MIR2392-201ENST00000584881 84 ntBASIC15.24■□□□□ 0.03
ASIC1P78348 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.24■□□□□ 0.03
ASIC1P78348 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ASIC1P78348 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC15.24■□□□□ 0.03
ASIC1P78348 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ASIC1P78348 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
ASIC1P78348 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC15.24■□□□□ 0.03
ASIC1P78348 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ASIC1P78348 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms