Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CLDN6P56747 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.06□□□□□ -0.32
CLDN6P56747 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN6P56747 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN6P56747 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN6P56747 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CLDN6P56747 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN6P56747 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN6P56747 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CLDN6P56747 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CLDN6P56747 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN6P56747 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CLDN6P56747 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CLDN6P56747 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CLDN6P56747 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CLDN6P56747 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN6P56747 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CLDN6P56747 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CLDN6P56747 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN6P56747 AC092865.2-201ENST00000439409 971 ntBASIC13.05□□□□□ -0.32
CLDN6P56747 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN6P56747 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CLDN6P56747 RN7SL838P-201ENST00000481676 295 ntBASIC13.05□□□□□ -0.32
CLDN6P56747 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 AC114812.4-201ENST00000506676 757 ntBASIC13.05□□□□□ -0.32
CLDN6P56747 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC13.05□□□□□ -0.32
CLDN6P56747 SRPK2P-201ENST00000523408 1100 ntBASIC13.05□□□□□ -0.32
CLDN6P56747 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
CLDN6P56747 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC13.05□□□□□ -0.32
CLDN6P56747 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN6P56747 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN6P56747 PCTP-206ENST00000573500 919 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN6P56747 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN6P56747 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN6P56747 AC254633.1-201ENST00000606790 345 ntBASIC13.05□□□□□ -0.32
CLDN6P56747 NF1P11-201ENST00000621292 1282 ntBASIC13.05□□□□□ -0.32
CLDN6P56747 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN6P56747 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN6P56747 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN6P56747 PTN-202ENST00000393083 1599 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN6P56747 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN6P56747 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN6P56747 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.05□□□□□ -0.32
CLDN6P56747 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CLDN6P56747 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN6P56747 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CLDN6P56747 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CLDN6P56747 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN6P56747 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN6P56747 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN6P56747 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
CLDN6P56747 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms