Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PDE6BP35913 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC16.56■□□□□ 0.24
PDE6BP35913 TMEM256P1-201ENST00000430550 340 ntBASIC16.56■□□□□ 0.24
PDE6BP35913 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 PDPN-208ENST00000509009 571 ntTSL 4 BASIC16.56■□□□□ 0.24
PDE6BP35913 AC099343.1-201ENST00000513481 609 ntBASIC16.56■□□□□ 0.24
PDE6BP35913 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC16.56■□□□□ 0.24
PDE6BP35913 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC16.56■□□□□ 0.24
PDE6BP35913 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC16.56■□□□□ 0.24
PDE6BP35913 AC136475.9-201ENST00000605240 497 ntBASIC16.56■□□□□ 0.24
PDE6BP35913 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC16.56■□□□□ 0.24
PDE6BP35913 CDIPT-AS1-203ENST00000638164 713 ntBASIC16.56■□□□□ 0.24
PDE6BP35913 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.56■□□□□ 0.24
PDE6BP35913 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PDE6BP35913 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.56■□□□□ 0.24
PDE6BP35913 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.56■□□□□ 0.24
PDE6BP35913 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.56■□□□□ 0.24
PDE6BP35913 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC16.56■□□□□ 0.24
PDE6BP35913 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.56■□□□□ 0.24
PDE6BP35913 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PDE6BP35913 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.55■□□□□ 0.24
PDE6BP35913 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.55■□□□□ 0.24
PDE6BP35913 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PDE6BP35913 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PDE6BP35913 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.55■□□□□ 0.24
PDE6BP35913 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC16.55■□□□□ 0.24
PDE6BP35913 MIR1226-201ENST00000408658 75 ntBASIC16.55■□□□□ 0.24
PDE6BP35913 AC005822.1-201ENST00000414124 1034 ntBASIC16.55■□□□□ 0.24
PDE6BP35913 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC16.55■□□□□ 0.24
PDE6BP35913 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC16.55■□□□□ 0.24
PDE6BP35913 AC008267.3-201ENST00000448776 712 ntBASIC16.55■□□□□ 0.24
PDE6BP35913 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC16.55■□□□□ 0.24
PDE6BP35913 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC16.55■□□□□ 0.24
PDE6BP35913 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC16.55■□□□□ 0.24
PDE6BP35913 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC16.55■□□□□ 0.24
PDE6BP35913 NAT9-219ENST00000582524 573 ntTSL 4 BASIC16.55■□□□□ 0.24
PDE6BP35913 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PDE6BP35913 DUX4L33-201ENST00000635217 958 ntBASIC16.55■□□□□ 0.24
PDE6BP35913 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.55■□□□□ 0.24
PDE6BP35913 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC16.55■□□□□ 0.24
PDE6BP35913 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.55■□□□□ 0.24
PDE6BP35913 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 IMPDH1P5-201ENST00000439688 1540 ntBASIC16.55■□□□□ 0.24
PDE6BP35913 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDE6BP35913 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.54■□□□□ 0.24
PDE6BP35913 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.54■□□□□ 0.24
PDE6BP35913 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PDE6BP35913 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC16.54■□□□□ 0.24
PDE6BP35913 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PDE6BP35913 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 AL161772.1-201ENST00000610494 4412 ntBASIC16.54■□□□□ 0.24
PDE6BP35913 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PDE6BP35913 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.54■□□□□ 0.24
PDE6BP35913 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 AC107918.4-201ENST00000641966 3141 ntBASIC16.54■□□□□ 0.24
PDE6BP35913 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PDE6BP35913 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PDE6BP35913 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PDE6BP35913 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC16.54■□□□□ 0.24
PDE6BP35913 SERPINB8P1-201ENST00000401898 377 ntBASIC16.54■□□□□ 0.24
PDE6BP35913 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC16.54■□□□□ 0.24
PDE6BP35913 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC16.54■□□□□ 0.24
PDE6BP35913 PLAC9P1-203ENST00000440031 223 ntBASIC16.54■□□□□ 0.24
PDE6BP35913 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDE6BP35913 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC16.54■□□□□ 0.24
PDE6BP35913 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC16.54■□□□□ 0.24
PDE6BP35913 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms