Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.18□□□□□ -0.46
APOC1P02654 AC044849.1-201ENST00000519737 1188 ntBASIC12.18□□□□□ -0.46
APOC1P02654 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.18□□□□□ -0.46
APOC1P02654 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.18□□□□□ -0.46
APOC1P02654 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.18□□□□□ -0.46
APOC1P02654 NDUFB10P1-201ENST00000567319 521 ntBASIC12.18□□□□□ -0.46
APOC1P02654 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.18□□□□□ -0.46
APOC1P02654 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.18□□□□□ -0.46
APOC1P02654 AL359881.2-201ENST00000602973 570 ntBASIC12.18□□□□□ -0.46
APOC1P02654 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.18□□□□□ -0.46
APOC1P02654 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.18□□□□□ -0.46
APOC1P02654 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.18□□□□□ -0.46
APOC1P02654 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
APOC1P02654 AL445250.1-201ENST00000641671 2259 ntBASIC12.18□□□□□ -0.46
APOC1P02654 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.18□□□□□ -0.46
APOC1P02654 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.18□□□□□ -0.46
APOC1P02654 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.18□□□□□ -0.46
APOC1P02654 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
APOC1P02654 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.18□□□□□ -0.46
APOC1P02654 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 AC018735.1-201ENST00000437208 1502 ntBASIC12.17□□□□□ -0.46
APOC1P02654 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
APOC1P02654 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
APOC1P02654 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
APOC1P02654 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.17□□□□□ -0.46
APOC1P02654 AL157791.1-201ENST00000553667 1699 ntBASIC12.17□□□□□ -0.46
APOC1P02654 DLX4-206ENST00000611342 1662 ntBASIC12.17□□□□□ -0.46
APOC1P02654 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
APOC1P02654 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.17□□□□□ -0.46
APOC1P02654 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.17□□□□□ -0.46
APOC1P02654 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 AC010970.1-201ENST00000445125 1848 ntBASIC12.17□□□□□ -0.46
APOC1P02654 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 OR8T1P-201ENST00000421347 918 ntBASIC12.17□□□□□ -0.46
APOC1P02654 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.17□□□□□ -0.46
APOC1P02654 POU5F1P2-201ENST00000521750 823 ntBASIC12.17□□□□□ -0.46
APOC1P02654 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.17□□□□□ -0.46
APOC1P02654 AC132825.4-202ENST00000578792 434 ntBASIC12.17□□□□□ -0.46
APOC1P02654 AC239800.4-201ENST00000603712 296 ntBASIC12.17□□□□□ -0.46
APOC1P02654 AC026740.1-201ENST00000607068 791 ntBASIC12.17□□□□□ -0.46
APOC1P02654 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
APOC1P02654 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
APOC1P02654 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.17□□□□□ -0.46
APOC1P02654 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.17□□□□□ -0.46
APOC1P02654 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC12.17□□□□□ -0.46
APOC1P02654 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.17□□□□□ -0.46
APOC1P02654 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.17□□□□□ -0.46
APOC1P02654 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.17□□□□□ -0.46
APOC1P02654 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 AC022497.1-201ENST00000624916 3691 ntBASIC12.17□□□□□ -0.46
APOC1P02654 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 CICP1-201ENST00000416803 2410 ntBASIC12.17□□□□□ -0.46
APOC1P02654 AC026992.2-203ENST00000563004 2419 ntBASIC12.17□□□□□ -0.46
APOC1P02654 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 AC020763.3-201ENST00000625095 2904 ntBASIC12.17□□□□□ -0.46
APOC1P02654 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.17□□□□□ -0.46
APOC1P02654 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC1P02654 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.17□□□□□ -0.46
APOC1P02654 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.17□□□□□ -0.46
APOC1P02654 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms