Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC019294.4-201ENST00000561777 2905 ntBASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 AC019109.1-201ENST00000401725 1874 ntBASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 AC083964.2-201ENST00000623988 2396 ntBASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 MRPL22P1-201ENST00000505398 616 ntBASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 AC095040.1-201ENST00000513286 675 ntBASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 NUDT4P2-201ENST00000578341 546 ntBASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 ABCD1P2-201ENST00000429313 1601 ntBASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 FAM90A12P-201ENST00000519497 2375 ntBASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 FAM90A24P-201ENST00000520792 2369 ntBASIC12.32□□□□□ -0.44
PARPBPQ9NWS1 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 AC073548.1-201ENST00000624088 1882 ntBASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 AC020763.3-201ENST00000625095 2904 ntBASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 FGFR3P1-201ENST00000449999 601 ntBASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 PRSS3P1-201ENST00000503996 742 ntBASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 KRT8P2-201ENST00000556193 944 ntBASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 AC138894.2-201ENST00000602838 371 ntBASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 AC007250.1-201ENST00000608934 338 ntBASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 AC105206.1-202ENST00000314927 2368 ntBASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms