Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SLC1A1P43005 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 MIR769-201ENST00000390225 118 ntBASIC14.29□□□□□ -0.12
SLC1A1P43005 AL583805.1-201ENST00000391389 531 ntBASIC14.29□□□□□ -0.12
SLC1A1P43005 AL807761.2-201ENST00000422849 729 ntBASIC14.29□□□□□ -0.12
SLC1A1P43005 FNTAP2-201ENST00000430308 634 ntBASIC14.29□□□□□ -0.12
SLC1A1P43005 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC1A1P43005 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC1A1P43005 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC1A1P43005 FTH1P22-201ENST00000456305 520 ntBASIC14.29□□□□□ -0.12
SLC1A1P43005 RN7SL11P-201ENST00000471305 293 ntBASIC14.29□□□□□ -0.12
SLC1A1P43005 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC1A1P43005 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 AL137779.3-201ENST00000553295 729 ntBASIC14.29□□□□□ -0.12
SLC1A1P43005 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC1A1P43005 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 NAA38-204ENST00000575208 529 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC1A1P43005 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 SIGLEC18P-201ENST00000602271 909 ntBASIC14.29□□□□□ -0.12
SLC1A1P43005 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SLC1A1P43005 AC091769.1-201ENST00000619576 568 ntBASIC14.29□□□□□ -0.12
SLC1A1P43005 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC1A1P43005 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC1A1P43005 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SLC1A1P43005 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC1A1P43005 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC14.29□□□□□ -0.12
SLC1A1P43005 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SLC1A1P43005 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SLC1A1P43005 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A1P43005 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A1P43005 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC1A1P43005 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SLC1A1P43005 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SLC1A1P43005 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SLC1A1P43005 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC1A1P43005 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC1A1P43005 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SLC1A1P43005 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SLC1A1P43005 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC1A1P43005 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC1A1P43005 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC1A1P43005 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.28□□□□□ -0.12
SLC1A1P43005 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SLC1A1P43005 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC1A1P43005 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SLC1A1P43005 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.28□□□□□ -0.12
SLC1A1P43005 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC1A1P43005 RN7SL767P-201ENST00000493013 295 ntBASIC14.28□□□□□ -0.12
SLC1A1P43005 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC1A1P43005 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms