Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
BMP4P12644 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
BMP4P12644 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
BMP4P12644 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BMP4P12644 AC010141.1-201ENST00000411585 623 ntBASIC12.67□□□□□ -0.38
BMP4P12644 YY1P1-201ENST00000427625 668 ntBASIC12.67□□□□□ -0.38
BMP4P12644 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.67□□□□□ -0.38
BMP4P12644 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
BMP4P12644 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.67□□□□□ -0.38
BMP4P12644 ZNF767P-206ENST00000513792 565 ntBASIC12.67□□□□□ -0.38
BMP4P12644 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BMP4P12644 AC044849.1-201ENST00000519737 1188 ntBASIC12.67□□□□□ -0.38
BMP4P12644 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.67□□□□□ -0.38
BMP4P12644 AP003171.2-201ENST00000528208 925 ntBASIC12.67□□□□□ -0.38
BMP4P12644 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.67□□□□□ -0.38
BMP4P12644 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BMP4P12644 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
BMP4P12644 MIR4683-201ENST00000579659 81 ntBASIC12.67□□□□□ -0.38
BMP4P12644 BNIP3P13-201ENST00000599968 566 ntBASIC12.67□□□□□ -0.38
BMP4P12644 AL606495.2-201ENST00000605867 535 ntBASIC12.67□□□□□ -0.38
BMP4P12644 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC12.67□□□□□ -0.38
BMP4P12644 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC12.67□□□□□ -0.38
BMP4P12644 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
BMP4P12644 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
BMP4P12644 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BMP4P12644 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
BMP4P12644 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BMP4P12644 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC12.67□□□□□ -0.38
BMP4P12644 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
BMP4P12644 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BMP4P12644 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
BMP4P12644 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BMP4P12644 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.67□□□□□ -0.38
BMP4P12644 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC12.67□□□□□ -0.38
BMP4P12644 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.67□□□□□ -0.38
BMP4P12644 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BMP4P12644 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BMP4P12644 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.67□□□□□ -0.38
BMP4P12644 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BMP4P12644 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BMP4P12644 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.66□□□□□ -0.38
BMP4P12644 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.66□□□□□ -0.38
BMP4P12644 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.66□□□□□ -0.38
BMP4P12644 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
BMP4P12644 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.66□□□□□ -0.38
BMP4P12644 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.66□□□□□ -0.38
BMP4P12644 AC004899.1-201ENST00000424687 1714 ntBASIC12.66□□□□□ -0.38
BMP4P12644 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 AC008764.8-201ENST00000623966 2717 ntBASIC12.66□□□□□ -0.38
BMP4P12644 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.66□□□□□ -0.38
BMP4P12644 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
BMP4P12644 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.66□□□□□ -0.38
BMP4P12644 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.66□□□□□ -0.38
BMP4P12644 NKAIN1P1-201ENST00000435754 582 ntBASIC12.66□□□□□ -0.38
BMP4P12644 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.66□□□□□ -0.38
BMP4P12644 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.66□□□□□ -0.38
BMP4P12644 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.66□□□□□ -0.38
BMP4P12644 ACTG1P17-201ENST00000558391 1119 ntBASIC12.66□□□□□ -0.38
BMP4P12644 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.66□□□□□ -0.38
BMP4P12644 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC12.66□□□□□ -0.38
BMP4P12644 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.66□□□□□ -0.38
BMP4P12644 AL162426.1-201ENST00000624141 743 ntBASIC12.66□□□□□ -0.38
BMP4P12644 AL805961.1-203ENST00000641078 1258 ntBASIC12.66□□□□□ -0.38
BMP4P12644 NAP1L6-202ENST00000641404 1222 ntBASIC12.66□□□□□ -0.38
BMP4P12644 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.66□□□□□ -0.38
BMP4P12644 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.66□□□□□ -0.38
BMP4P12644 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.66□□□□□ -0.38
BMP4P12644 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
BMP4P12644 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
BMP4P12644 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.66□□□□□ -0.38
BMP4P12644 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BMP4P12644 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
BMP4P12644 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BMP4P12644 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.65□□□□□ -0.38
BMP4P12644 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
BMP4P12644 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.65□□□□□ -0.38
BMP4P12644 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BMP4P12644 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BMP4P12644 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BMP4P12644 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms