Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 AL450468.2-201ENST00000565955 1889 ntBASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PHACTR1Q9C0D0 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 LINC02228-202ENST00000641261 2489 ntBASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 AC110048.1-201ENST00000604293 2157 ntBASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 GOLGA2P4-201ENST00000441462 777 ntBASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 AC098934.1-203ENST00000442868 1262 ntBASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 AC125604.1-201ENST00000496255 707 ntBASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 MIR4259-201ENST00000584466 101 ntBASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 AC060766.1-201ENST00000590824 627 ntBASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHACTR1Q9C0D0 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 AC027369.3-201ENST00000530465 3707 ntBASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 AL591846.1-201ENST00000451736 433 ntBASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 AC005740.2-201ENST00000511085 419 ntBASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 ALG1L13P-202ENST00000519320 584 ntBASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 RN7SL560P-201ENST00000577943 264 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms